Hb_004645_070

Information

Type -
Description -
Location Contig4645: 59031-64721
Sequence    

Annotation

kegg
ID rcu:RCOM_0836600
description transferase, transferring glycosyl groups, putative (EC:2.4.1.134)
nr
ID XP_012067653.1
description PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]
swissprot
ID Q8L7F9
description Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1
trembl
ID A0A067KYF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15613 PE=4 SV=1
Gene Ontology
ID GO:0016020
description beta- -galactosyltransferase 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43916: 58994-64015 , PASA_asmbl_43917: 63156-64659
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004645_070 0.0 - - PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]
2 Hb_005568_040 0.0512381923 - - PREDICTED: uncharacterized protein LOC105628163 isoform X2 [Jatropha curcas]
3 Hb_000479_240 0.0583726197 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
4 Hb_000010_420 0.062083794 - - Callose synthase 10 [Morus notabilis]
5 Hb_000331_580 0.0621734391 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
6 Hb_000635_200 0.0627386739 rubber biosynthesis Gene Name: SRPP5 PREDICTED: REF/SRPP-like protein At1g67360 [Jatropha curcas]
7 Hb_001167_050 0.066404521 - - PREDICTED: uncharacterized protein LOC105648014 [Jatropha curcas]
8 Hb_031527_030 0.0689515623 - - PREDICTED: ribosomal RNA processing protein 1 homolog [Jatropha curcas]
9 Hb_009252_050 0.0705995408 - - protein binding protein, putative [Ricinus communis]
10 Hb_000003_100 0.0716507378 transcription factor TF Family: SNF2 PREDICTED: transcription termination factor 2 isoform X5 [Jatropha curcas]
11 Hb_003216_090 0.0718354842 - - PREDICTED: nuclear pore complex protein NUP133 isoform X1 [Jatropha curcas]
12 Hb_000008_240 0.0719119179 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000037_220 0.0729505744 - - PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Jatropha curcas]
14 Hb_004429_010 0.0735223101 - - calcineurin-like phosphoesterase [Manihot esculenta]
15 Hb_002045_250 0.0756066081 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP63 isoform X3 [Jatropha curcas]
16 Hb_004410_120 0.0756523256 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
17 Hb_004204_130 0.0776611738 - - PREDICTED: uncharacterized protein LOC103930912 [Pyrus x bretschneideri]
18 Hb_003912_070 0.0781006641 - - PREDICTED: nuclear pore complex protein NUP85 [Jatropha curcas]
19 Hb_004517_020 0.0794087074 - - PREDICTED: probable ubiquitin-like-specific protease 2B isoform X1 [Jatropha curcas]
20 Hb_001259_120 0.0799626285 - - hypothetical protein EUGRSUZ_C043222, partial [Eucalyptus grandis]

Gene co-expression network

sample Hb_004645_070 Hb_004645_070 Hb_005568_040 Hb_005568_040 Hb_004645_070--Hb_005568_040 Hb_000479_240 Hb_000479_240 Hb_004645_070--Hb_000479_240 Hb_000010_420 Hb_000010_420 Hb_004645_070--Hb_000010_420 Hb_000331_580 Hb_000331_580 Hb_004645_070--Hb_000331_580 Hb_000635_200 Hb_000635_200 Hb_004645_070--Hb_000635_200 Hb_001167_050 Hb_001167_050 Hb_004645_070--Hb_001167_050 Hb_005568_040--Hb_000479_240 Hb_005568_040--Hb_000331_580 Hb_000008_240 Hb_000008_240 Hb_005568_040--Hb_000008_240 Hb_003912_070 Hb_003912_070 Hb_005568_040--Hb_003912_070 Hb_004586_290 Hb_004586_290 Hb_005568_040--Hb_004586_290 Hb_001904_030 Hb_001904_030 Hb_000479_240--Hb_001904_030 Hb_009252_050 Hb_009252_050 Hb_000479_240--Hb_009252_050 Hb_000479_240--Hb_000008_240 Hb_003604_050 Hb_003604_050 Hb_000479_240--Hb_003604_050 Hb_001259_120 Hb_001259_120 Hb_000010_420--Hb_001259_120 Hb_000010_420--Hb_001167_050 Hb_001341_160 Hb_001341_160 Hb_000010_420--Hb_001341_160 Hb_000010_420--Hb_001904_030 Hb_009615_160 Hb_009615_160 Hb_000010_420--Hb_009615_160 Hb_000331_580--Hb_000008_240 Hb_000003_100 Hb_000003_100 Hb_000331_580--Hb_000003_100 Hb_002007_110 Hb_002007_110 Hb_000331_580--Hb_002007_110 Hb_123531_010 Hb_123531_010 Hb_000331_580--Hb_123531_010 Hb_006531_020 Hb_006531_020 Hb_000331_580--Hb_006531_020 Hb_002092_070 Hb_002092_070 Hb_000635_200--Hb_002092_070 Hb_000635_200--Hb_000010_420 Hb_002045_250 Hb_002045_250 Hb_000635_200--Hb_002045_250 Hb_004429_010 Hb_004429_010 Hb_000635_200--Hb_004429_010 Hb_002284_170 Hb_002284_170 Hb_000635_200--Hb_002284_170 Hb_001167_050--Hb_000331_580 Hb_001167_050--Hb_005568_040 Hb_012286_040 Hb_012286_040 Hb_001167_050--Hb_012286_040 Hb_001951_170 Hb_001951_170 Hb_001167_050--Hb_001951_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.98124 17.6296 9.08396 14.61 9.18429 10.6135
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.01401 3.93083 7.15851 12.9708 9.63073

CAGE analysis