Hb_009615_160

Information

Type -
Description -
Location Contig9615: 133972-140383
Sequence    

Annotation

kegg
ID vvi:100255934
description pyruvate kinase, cytosolic isozyme
nr
ID XP_012068541.1
description PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
swissprot
ID Q42806
description Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1
trembl
ID A0A067KZP4
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_24457 PE=3 SV=1
Gene Ontology
ID GO:0005737
description pyruvate cytosolic isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63740: 133768-139987 , PASA_asmbl_63742: 137536-137898
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009615_160 0.0 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
2 Hb_001329_200 0.0522632289 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 1 [Jatropha curcas]
3 Hb_016172_030 0.0628535657 - - PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Jatropha curcas]
4 Hb_021165_010 0.0672689598 - - PREDICTED: splicing factor U2af large subunit B-like isoform X1 [Jatropha curcas]
5 Hb_005074_020 0.0686902212 - - PREDICTED: uncharacterized protein LOC105644455 isoform X1 [Jatropha curcas]
6 Hb_060980_010 0.0734796435 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Populus euphratica]
7 Hb_024650_080 0.0735612603 - - PREDICTED: BTB/POZ domain-containing protein At3g09030 [Jatropha curcas]
8 Hb_000010_420 0.0740890848 - - Callose synthase 10 [Morus notabilis]
9 Hb_027506_010 0.0750238276 - - PREDICTED: cullin-4 [Jatropha curcas]
10 Hb_002686_140 0.0770070616 - - PREDICTED: general negative regulator of transcription subunit 3 isoform X1 [Jatropha curcas]
11 Hb_008289_040 0.0776296926 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Jatropha curcas]
12 Hb_007245_020 0.0778916611 - - PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Populus euphratica]
13 Hb_022425_030 0.0781217887 - - PREDICTED: casein kinase I [Jatropha curcas]
14 Hb_000103_290 0.078444218 - - PREDICTED: dymeclin isoform X1 [Jatropha curcas]
15 Hb_001097_040 0.0793537286 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
16 Hb_002276_040 0.0806940034 - - PREDICTED: sodium-coupled neutral amino acid transporter 3-like [Jatropha curcas]
17 Hb_001828_170 0.0810976258 - - PREDICTED: protein TPLATE [Jatropha curcas]
18 Hb_001085_080 0.0824606629 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
19 Hb_065500_020 0.0829749423 - - Exocyst complex component sec3A isoform 1 [Theobroma cacao]
20 Hb_001511_180 0.0831772809 - - Clathrin heavy chain 2 -like protein [Gossypium arboreum]

Gene co-expression network

sample Hb_009615_160 Hb_009615_160 Hb_001329_200 Hb_001329_200 Hb_009615_160--Hb_001329_200 Hb_016172_030 Hb_016172_030 Hb_009615_160--Hb_016172_030 Hb_021165_010 Hb_021165_010 Hb_009615_160--Hb_021165_010 Hb_005074_020 Hb_005074_020 Hb_009615_160--Hb_005074_020 Hb_060980_010 Hb_060980_010 Hb_009615_160--Hb_060980_010 Hb_024650_080 Hb_024650_080 Hb_009615_160--Hb_024650_080 Hb_007839_020 Hb_007839_020 Hb_001329_200--Hb_007839_020 Hb_022425_060 Hb_022425_060 Hb_001329_200--Hb_022425_060 Hb_000802_090 Hb_000802_090 Hb_001329_200--Hb_000802_090 Hb_011360_050 Hb_011360_050 Hb_001329_200--Hb_011360_050 Hb_001328_080 Hb_001328_080 Hb_001329_200--Hb_001328_080 Hb_016172_030--Hb_060980_010 Hb_016172_030--Hb_021165_010 Hb_004037_020 Hb_004037_020 Hb_016172_030--Hb_004037_020 Hb_027506_010 Hb_027506_010 Hb_016172_030--Hb_027506_010 Hb_065500_020 Hb_065500_020 Hb_016172_030--Hb_065500_020 Hb_016172_030--Hb_024650_080 Hb_000702_090 Hb_000702_090 Hb_021165_010--Hb_000702_090 Hb_008289_040 Hb_008289_040 Hb_021165_010--Hb_008289_040 Hb_000017_230 Hb_000017_230 Hb_021165_010--Hb_000017_230 Hb_021165_010--Hb_060980_010 Hb_001114_110 Hb_001114_110 Hb_021165_010--Hb_001114_110 Hb_011883_020 Hb_011883_020 Hb_005074_020--Hb_011883_020 Hb_000080_110 Hb_000080_110 Hb_005074_020--Hb_000080_110 Hb_027760_060 Hb_027760_060 Hb_005074_020--Hb_027760_060 Hb_002276_040 Hb_002276_040 Hb_005074_020--Hb_002276_040 Hb_011925_020 Hb_011925_020 Hb_005074_020--Hb_011925_020 Hb_060980_010--Hb_027506_010 Hb_019840_030 Hb_019840_030 Hb_060980_010--Hb_019840_030 Hb_060980_010--Hb_065500_020 Hb_000409_050 Hb_000409_050 Hb_060980_010--Hb_000409_050 Hb_000001_170 Hb_000001_170 Hb_060980_010--Hb_000001_170 Hb_001408_110 Hb_001408_110 Hb_024650_080--Hb_001408_110 Hb_022425_030 Hb_022425_030 Hb_024650_080--Hb_022425_030 Hb_000103_290 Hb_000103_290 Hb_024650_080--Hb_000103_290 Hb_000926_150 Hb_000926_150 Hb_024650_080--Hb_000926_150 Hb_000020_160 Hb_000020_160 Hb_024650_080--Hb_000020_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.89428 27.7876 20.8399 28.758 14.1072 11.4811
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.67437 8.15688 12.7919 25.9387 18.5653

CAGE analysis