Hb_024650_080

Information

Type -
Description -
Location Contig24650: 75386-76807
Sequence    

Annotation

kegg
ID rcu:RCOM_1152050
description protein binding protein, putative
nr
ID XP_012087893.1
description PREDICTED: BTB/POZ domain-containing protein At3g09030 [Jatropha curcas]
swissprot
ID Q9S7R7
description BTB/POZ domain-containing protein At3g09030 OS=Arabidopsis thaliana GN=At3g09030 PE=2 SV=1
trembl
ID A0A067JNT2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25042 PE=4 SV=1
Gene Ontology
ID GO:0051260
description btb poz domain-containing protein at3g09030

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25619: 76652-76782
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_024650_080 0.0 - - PREDICTED: BTB/POZ domain-containing protein At3g09030 [Jatropha curcas]
2 Hb_001408_110 0.058391544 - - hypothetical protein EUGRSUZ_I02762 [Eucalyptus grandis]
3 Hb_016172_030 0.0587747648 - - PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Jatropha curcas]
4 Hb_022425_030 0.0638010212 - - PREDICTED: casein kinase I [Jatropha curcas]
5 Hb_000103_290 0.0672560456 - - PREDICTED: dymeclin isoform X1 [Jatropha curcas]
6 Hb_000926_150 0.0717083246 - - PREDICTED: splicing factor, suppressor of white-apricot homolog isoform X1 [Jatropha curcas]
7 Hb_000020_160 0.0718181789 - - PREDICTED: E3 ubiquitin-protein ligase RING1-like [Gossypium raimondii]
8 Hb_007245_020 0.0720961293 - - PREDICTED: pre-mRNA-processing factor 17-like isoform X1 [Populus euphratica]
9 Hb_004037_020 0.0729631257 - - PREDICTED: uncharacterized protein LOC105632366 isoform X1 [Jatropha curcas]
10 Hb_031527_030 0.0732886591 - - PREDICTED: ribosomal RNA processing protein 1 homolog [Jatropha curcas]
11 Hb_009615_160 0.0735612603 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
12 Hb_001329_200 0.0749369035 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 1 [Jatropha curcas]
13 Hb_000008_240 0.0751809823 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000089_180 0.0754317065 - - PREDICTED: homoserine kinase-like [Jatropha curcas]
15 Hb_000671_080 0.0767602846 - - PREDICTED: 5'-adenylylsulfate reductase-like 4 [Jatropha curcas]
16 Hb_000085_450 0.0767836396 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]
17 Hb_170077_010 0.0778457885 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Jatropha curcas]
18 Hb_033312_130 0.0779694663 - - PREDICTED: protein TIC 40, chloroplastic [Jatropha curcas]
19 Hb_008165_020 0.0784901763 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X1 [Jatropha curcas]
20 Hb_007839_020 0.0786644891 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_024650_080 Hb_024650_080 Hb_001408_110 Hb_001408_110 Hb_024650_080--Hb_001408_110 Hb_016172_030 Hb_016172_030 Hb_024650_080--Hb_016172_030 Hb_022425_030 Hb_022425_030 Hb_024650_080--Hb_022425_030 Hb_000103_290 Hb_000103_290 Hb_024650_080--Hb_000103_290 Hb_000926_150 Hb_000926_150 Hb_024650_080--Hb_000926_150 Hb_000020_160 Hb_000020_160 Hb_024650_080--Hb_000020_160 Hb_000089_180 Hb_000089_180 Hb_001408_110--Hb_000089_180 Hb_004037_020 Hb_004037_020 Hb_001408_110--Hb_004037_020 Hb_007839_020 Hb_007839_020 Hb_001408_110--Hb_007839_020 Hb_001241_010 Hb_001241_010 Hb_001408_110--Hb_001241_010 Hb_010407_080 Hb_010407_080 Hb_001408_110--Hb_010407_080 Hb_060980_010 Hb_060980_010 Hb_016172_030--Hb_060980_010 Hb_021165_010 Hb_021165_010 Hb_016172_030--Hb_021165_010 Hb_016172_030--Hb_004037_020 Hb_027506_010 Hb_027506_010 Hb_016172_030--Hb_027506_010 Hb_065500_020 Hb_065500_020 Hb_016172_030--Hb_065500_020 Hb_004044_050 Hb_004044_050 Hb_022425_030--Hb_004044_050 Hb_000347_300 Hb_000347_300 Hb_022425_030--Hb_000347_300 Hb_000008_240 Hb_000008_240 Hb_022425_030--Hb_000008_240 Hb_031527_030 Hb_031527_030 Hb_022425_030--Hb_031527_030 Hb_001828_170 Hb_001828_170 Hb_022425_030--Hb_001828_170 Hb_048476_080 Hb_048476_080 Hb_000103_290--Hb_048476_080 Hb_000103_290--Hb_016172_030 Hb_000954_010 Hb_000954_010 Hb_000103_290--Hb_000954_010 Hb_000103_290--Hb_060980_010 Hb_000103_290--Hb_027506_010 Hb_116349_130 Hb_116349_130 Hb_000926_150--Hb_116349_130 Hb_000035_100 Hb_000035_100 Hb_000926_150--Hb_000035_100 Hb_000856_300 Hb_000856_300 Hb_000926_150--Hb_000856_300 Hb_001257_100 Hb_001257_100 Hb_000926_150--Hb_001257_100 Hb_000373_170 Hb_000373_170 Hb_000926_150--Hb_000373_170 Hb_000358_100 Hb_000358_100 Hb_000020_160--Hb_000358_100 Hb_000358_220 Hb_000358_220 Hb_000020_160--Hb_000358_220 Hb_044486_020 Hb_044486_020 Hb_000020_160--Hb_044486_020 Hb_000172_340 Hb_000172_340 Hb_000020_160--Hb_000172_340 Hb_170077_010 Hb_170077_010 Hb_000020_160--Hb_170077_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.62769 10.9144 6.90037 10.5347 4.75344 4.48326
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.65394 4.20732 3.42955 8.01711 8.3998

CAGE analysis