Hb_012194_060

Information

Type -
Description -
Location Contig12194: 46848-47075
Sequence    

Annotation

kegg
ID rcu:RCOM_1086370
description hypothetical protein
nr
ID XP_012074670.1
description PREDICTED: uncharacterized protein LOC105636108 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10420 PE=4 SV=1
Gene Ontology
ID GO:0005634
description PREDICTED: uncharacterized protein LOC105636108

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012194_060 0.0 - - PREDICTED: uncharacterized protein LOC105636108 [Jatropha curcas]
2 Hb_000265_140 0.079552401 - - PREDICTED: transmembrane 9 superfamily member 12 [Jatropha curcas]
3 Hb_002486_050 0.0822288547 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
4 Hb_000035_220 0.0845109725 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
5 Hb_005062_110 0.0862140904 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
6 Hb_000085_260 0.089689633 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
7 Hb_000701_030 0.0907458488 - - Sodium/hydrogen exchanger 6 -like protein [Gossypium arboreum]
8 Hb_021576_070 0.0979205856 - - hypothetical protein PRUPE_ppa002736mg [Prunus persica]
9 Hb_010042_030 0.0981324725 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]
10 Hb_007765_040 0.0985858523 - - Cytosolic enolase isoform 3 [Theobroma cacao]
11 Hb_003540_080 0.1001311638 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
12 Hb_001159_030 0.1014627464 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
13 Hb_000256_230 0.1033107747 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
14 Hb_009252_030 0.1083781448 - - PREDICTED: CASP-like protein 4A3 [Jatropha curcas]
15 Hb_000390_050 0.1089889551 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]
16 Hb_000665_170 0.1102734279 - - PREDICTED: probable beta-1,3-galactosyltransferase 10 [Jatropha curcas]
17 Hb_003038_040 0.1103856593 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
18 Hb_000503_020 0.1118875622 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
19 Hb_003994_220 0.1129365658 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
20 Hb_001754_020 0.1137595892 - - PREDICTED: kinesin-13A isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_012194_060 Hb_012194_060 Hb_000265_140 Hb_000265_140 Hb_012194_060--Hb_000265_140 Hb_002486_050 Hb_002486_050 Hb_012194_060--Hb_002486_050 Hb_000035_220 Hb_000035_220 Hb_012194_060--Hb_000035_220 Hb_005062_110 Hb_005062_110 Hb_012194_060--Hb_005062_110 Hb_000085_260 Hb_000085_260 Hb_012194_060--Hb_000085_260 Hb_000701_030 Hb_000701_030 Hb_012194_060--Hb_000701_030 Hb_000265_140--Hb_000701_030 Hb_002603_040 Hb_002603_040 Hb_000265_140--Hb_002603_040 Hb_000265_140--Hb_000085_260 Hb_001754_020 Hb_001754_020 Hb_000265_140--Hb_001754_020 Hb_021576_070 Hb_021576_070 Hb_000265_140--Hb_021576_070 Hb_003209_130 Hb_003209_130 Hb_002486_050--Hb_003209_130 Hb_000256_230 Hb_000256_230 Hb_002486_050--Hb_000256_230 Hb_002486_050--Hb_005062_110 Hb_000622_110 Hb_000622_110 Hb_002486_050--Hb_000622_110 Hb_000665_170 Hb_000665_170 Hb_002486_050--Hb_000665_170 Hb_002486_050--Hb_000085_260 Hb_003540_080 Hb_003540_080 Hb_000035_220--Hb_003540_080 Hb_000510_150 Hb_000510_150 Hb_000035_220--Hb_000510_150 Hb_000035_220--Hb_000665_170 Hb_000035_220--Hb_000256_230 Hb_004126_040 Hb_004126_040 Hb_000035_220--Hb_004126_040 Hb_005062_110--Hb_000085_260 Hb_010042_030 Hb_010042_030 Hb_005062_110--Hb_010042_030 Hb_001159_030 Hb_001159_030 Hb_005062_110--Hb_001159_030 Hb_000503_020 Hb_000503_020 Hb_005062_110--Hb_000503_020 Hb_005062_110--Hb_000622_110 Hb_000085_260--Hb_001159_030 Hb_000085_260--Hb_010042_030 Hb_000098_050 Hb_000098_050 Hb_000085_260--Hb_000098_050 Hb_000085_260--Hb_000503_020 Hb_000679_100 Hb_000679_100 Hb_000085_260--Hb_000679_100 Hb_000701_030--Hb_021576_070 Hb_000494_030 Hb_000494_030 Hb_000701_030--Hb_000494_030 Hb_000254_070 Hb_000254_070 Hb_000701_030--Hb_000254_070 Hb_000003_310 Hb_000003_310 Hb_000701_030--Hb_000003_310 Hb_001097_040 Hb_001097_040 Hb_000701_030--Hb_001097_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.14772 12.2312 16.5475 38.8957 9.48769 15.2467
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.13915 4.10456 10.5806 13.8393 19.8049

CAGE analysis