Hb_000703_100

Information

Type -
Description -
Location Contig703: 112634-119064
Sequence    

Annotation

kegg
ID rcu:RCOM_0613780
description 2-deoxyglucose-6-phosphate phosphatase, putative
nr
ID XP_012074183.1
description PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Jatropha curcas]
swissprot
ID Q84MD8
description Bifunctional riboflavin kinase/FMN phosphatase OS=Arabidopsis thaliana GN=FHY PE=1 SV=1
trembl
ID B9SRC3
description 2-deoxyglucose-6-phosphate phosphatase, putative OS=Ricinus communis GN=RCOM_0613780 PE=4 SV=1
Gene Ontology
ID GO:0016740
description bifunctional riboflavin kinase fmn phosphatase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54923: 106762-111693 , PASA_asmbl_54925: 112904-130516 , PASA_asmbl_54926: 116604-117130
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000703_100 0.0 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Jatropha curcas]
2 Hb_002400_320 0.0986680749 - - conserved hypothetical protein [Ricinus communis]
3 Hb_014361_060 0.1154004279 - - PREDICTED: probable prolyl 4-hydroxylase 9 [Jatropha curcas]
4 Hb_008406_180 0.1174934503 - - RING/U-box superfamily protein isoform 2 [Theobroma cacao]
5 Hb_000922_300 0.1219735907 - - PREDICTED: GDSL esterase/lipase At5g62930 isoform X1 [Cucumis melo]
6 Hb_000665_190 0.1220710262 - - conserved hypothetical protein [Ricinus communis]
7 Hb_029584_040 0.1242813573 - - hypothetical protein Csa_1G586790 [Cucumis sativus]
8 Hb_000002_480 0.1310436059 - - PREDICTED: protein WVD2-like 1 isoform X2 [Jatropha curcas]
9 Hb_000160_070 0.1320501219 - - PREDICTED: uncharacterized protein LOC105648219 [Jatropha curcas]
10 Hb_027445_030 0.1353678535 - - F-box/LRR-repeat protein, putative [Ricinus communis]
11 Hb_005977_100 0.1360263876 - - PREDICTED: tetraspanin-18 [Jatropha curcas]
12 Hb_007477_050 0.13922711 - - PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Jatropha curcas]
13 Hb_012339_010 0.1393850358 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000058_110 0.1395606892 - - PREDICTED: putative BPI/LBP family protein At1g04970 isoform X1 [Jatropha curcas]
15 Hb_000890_230 0.1401309046 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
16 Hb_000399_060 0.1408316263 - - PREDICTED: uncharacterized protein LOC105649658 [Jatropha curcas]
17 Hb_003209_130 0.1413204354 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
18 Hb_001349_030 0.1449475988 - - PREDICTED: uncharacterized protein LOC105641975 isoform X1 [Jatropha curcas]
19 Hb_000796_150 0.147048147 - - PREDICTED: uncharacterized protein LOC105136996 isoform X1 [Populus euphratica]
20 Hb_000320_340 0.1476013831 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]

Gene co-expression network

sample Hb_000703_100 Hb_000703_100 Hb_002400_320 Hb_002400_320 Hb_000703_100--Hb_002400_320 Hb_014361_060 Hb_014361_060 Hb_000703_100--Hb_014361_060 Hb_008406_180 Hb_008406_180 Hb_000703_100--Hb_008406_180 Hb_000922_300 Hb_000922_300 Hb_000703_100--Hb_000922_300 Hb_000665_190 Hb_000665_190 Hb_000703_100--Hb_000665_190 Hb_029584_040 Hb_029584_040 Hb_000703_100--Hb_029584_040 Hb_002400_320--Hb_008406_180 Hb_005977_100 Hb_005977_100 Hb_002400_320--Hb_005977_100 Hb_000212_120 Hb_000212_120 Hb_002400_320--Hb_000212_120 Hb_005015_060 Hb_005015_060 Hb_002400_320--Hb_005015_060 Hb_004531_100 Hb_004531_100 Hb_002400_320--Hb_004531_100 Hb_000256_230 Hb_000256_230 Hb_014361_060--Hb_000256_230 Hb_000418_020 Hb_000418_020 Hb_014361_060--Hb_000418_020 Hb_000903_010 Hb_000903_010 Hb_014361_060--Hb_000903_010 Hb_000665_170 Hb_000665_170 Hb_014361_060--Hb_000665_170 Hb_000389_030 Hb_000389_030 Hb_014361_060--Hb_000389_030 Hb_000300_090 Hb_000300_090 Hb_014361_060--Hb_000300_090 Hb_000049_020 Hb_000049_020 Hb_008406_180--Hb_000049_020 Hb_000890_230 Hb_000890_230 Hb_008406_180--Hb_000890_230 Hb_001157_230 Hb_001157_230 Hb_008406_180--Hb_001157_230 Hb_000056_130 Hb_000056_130 Hb_008406_180--Hb_000056_130 Hb_002226_080 Hb_002226_080 Hb_008406_180--Hb_002226_080 Hb_000922_300--Hb_008406_180 Hb_000787_060 Hb_000787_060 Hb_000922_300--Hb_000787_060 Hb_000139_530 Hb_000139_530 Hb_000922_300--Hb_000139_530 Hb_000922_300--Hb_000890_230 Hb_004994_050 Hb_004994_050 Hb_000922_300--Hb_004994_050 Hb_011486_040 Hb_011486_040 Hb_000922_300--Hb_011486_040 Hb_001049_150 Hb_001049_150 Hb_000665_190--Hb_001049_150 Hb_003994_300 Hb_003994_300 Hb_000665_190--Hb_003994_300 Hb_027445_030 Hb_027445_030 Hb_000665_190--Hb_027445_030 Hb_003746_010 Hb_003746_010 Hb_000665_190--Hb_003746_010 Hb_003540_080 Hb_003540_080 Hb_000665_190--Hb_003540_080 Hb_011926_040 Hb_011926_040 Hb_000665_190--Hb_011926_040 Hb_077549_010 Hb_077549_010 Hb_029584_040--Hb_077549_010 Hb_029584_040--Hb_002400_320 Hb_000663_020 Hb_000663_020 Hb_029584_040--Hb_000663_020 Hb_000186_300 Hb_000186_300 Hb_029584_040--Hb_000186_300 Hb_002316_140 Hb_002316_140 Hb_029584_040--Hb_002316_140 Hb_000160_070 Hb_000160_070 Hb_029584_040--Hb_000160_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.895126 1.05268 2.04445 4.46508 1.82909 1.08151
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.54973 0.943641 0.362113 0.790378 2.41495

CAGE analysis