Hb_000212_120

Information

Type -
Description -
Location Contig212: 160357-162914
Sequence    

Annotation

kegg
ID rcu:RCOM_1077380
description hydrolase, putative
nr
ID KDP26912.1
description hypothetical protein JCGZ_18070 [Jatropha curcas]
swissprot
ID Q0WVZ1
description Putative metallophosphoesterase At3g03305 OS=Arabidopsis thaliana GN=At3g03305 PE=2 SV=1
trembl
ID A0A067JSP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18070 PE=4 SV=1
Gene Ontology
ID GO:0016787
description metallophosphoesterase at3g03305

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21941: 161110-162430
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000212_120 0.0 - - hypothetical protein JCGZ_18070 [Jatropha curcas]
2 Hb_002774_190 0.0517214934 - - Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis]
3 Hb_001876_040 0.0590767386 - - PREDICTED: mucin-5B [Jatropha curcas]
4 Hb_001157_230 0.0658091066 - - Protein AFR, putative [Ricinus communis]
5 Hb_032202_220 0.0767083034 - - ring finger protein, putative [Ricinus communis]
6 Hb_000061_180 0.077153681 - - exonuclease, putative [Ricinus communis]
7 Hb_002883_030 0.0818482812 - - PREDICTED: uncharacterized protein LOC105638222 [Jatropha curcas]
8 Hb_000375_390 0.0826193927 - - poly-A binding protein, putative [Ricinus communis]
9 Hb_000300_270 0.0828333166 - - cationic amino acid transporter, putative [Ricinus communis]
10 Hb_024184_010 0.0840391685 - - PREDICTED: clustered mitochondria protein-like isoform X1 [Citrus sinensis]
11 Hb_028487_070 0.0860257516 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000049_020 0.0865492382 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
13 Hb_002027_080 0.0869003074 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105650047 [Jatropha curcas]
14 Hb_134849_010 0.0870074055 - - ATP synthase subunit d, putative [Ricinus communis]
15 Hb_004531_100 0.0876028653 - - PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X1 [Jatropha curcas]
16 Hb_003581_200 0.087615767 - - PREDICTED: uncharacterized protein LOC105640179 [Jatropha curcas]
17 Hb_015099_030 0.0884088457 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
18 Hb_012150_030 0.089787061 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
19 Hb_004452_120 0.0919839782 - - PREDICTED: uncharacterized protein LOC105639574 [Jatropha curcas]
20 Hb_048093_010 0.0920346127 - - PREDICTED: calcium uniporter protein 6, mitochondrial-like [Jatropha curcas]

Gene co-expression network

sample Hb_000212_120 Hb_000212_120 Hb_002774_190 Hb_002774_190 Hb_000212_120--Hb_002774_190 Hb_001876_040 Hb_001876_040 Hb_000212_120--Hb_001876_040 Hb_001157_230 Hb_001157_230 Hb_000212_120--Hb_001157_230 Hb_032202_220 Hb_032202_220 Hb_000212_120--Hb_032202_220 Hb_000061_180 Hb_000061_180 Hb_000212_120--Hb_000061_180 Hb_002883_030 Hb_002883_030 Hb_000212_120--Hb_002883_030 Hb_028487_070 Hb_028487_070 Hb_002774_190--Hb_028487_070 Hb_002774_190--Hb_032202_220 Hb_134849_010 Hb_134849_010 Hb_002774_190--Hb_134849_010 Hb_000375_390 Hb_000375_390 Hb_002774_190--Hb_000375_390 Hb_002774_190--Hb_000061_180 Hb_001876_040--Hb_001157_230 Hb_022250_010 Hb_022250_010 Hb_001876_040--Hb_022250_010 Hb_001876_040--Hb_032202_220 Hb_024184_010 Hb_024184_010 Hb_001876_040--Hb_024184_010 Hb_002027_080 Hb_002027_080 Hb_001876_040--Hb_002027_080 Hb_001157_230--Hb_022250_010 Hb_001157_230--Hb_032202_220 Hb_001157_230--Hb_024184_010 Hb_001029_040 Hb_001029_040 Hb_001157_230--Hb_001029_040 Hb_001301_270 Hb_001301_270 Hb_032202_220--Hb_001301_270 Hb_000078_140 Hb_000078_140 Hb_032202_220--Hb_000078_140 Hb_032202_220--Hb_000061_180 Hb_000061_180--Hb_000375_390 Hb_000023_260 Hb_000023_260 Hb_000061_180--Hb_000023_260 Hb_007975_060 Hb_007975_060 Hb_000061_180--Hb_007975_060 Hb_004452_120 Hb_004452_120 Hb_000061_180--Hb_004452_120 Hb_133702_010 Hb_133702_010 Hb_000061_180--Hb_133702_010 Hb_002157_120 Hb_002157_120 Hb_000061_180--Hb_002157_120 Hb_000345_160 Hb_000345_160 Hb_002883_030--Hb_000345_160 Hb_000300_270 Hb_000300_270 Hb_002883_030--Hb_000300_270 Hb_002897_090 Hb_002897_090 Hb_002883_030--Hb_002897_090 Hb_001662_100 Hb_001662_100 Hb_002883_030--Hb_001662_100 Hb_000049_020 Hb_000049_020 Hb_002883_030--Hb_000049_020 Hb_004037_020 Hb_004037_020 Hb_002883_030--Hb_004037_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.4993 11.8178 21.2509 27.0161 12.0805 13.7647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.5224 13.5076 9.04244 13.2258 30.7058

CAGE analysis