Hb_004531_100

Information

Type -
Description -
Location Contig4531: 57971-64292
Sequence    

Annotation

kegg
ID pop:POPTR_0001s18750g
description POPTRDRAFT_829561; metallo-beta-lactamase family protein
nr
ID XP_012073409.1
description PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9GL73
description Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla GN=ELAC2 PE=2 SV=1
trembl
ID A0A067KYE8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06326 PE=3 SV=1
Gene Ontology
ID GO:0008033
description zinc phosphodiesterase elac protein 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43304: 58026-62012 , PASA_asmbl_43305: 61844-62167
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004531_100 0.0 - - PREDICTED: zinc phosphodiesterase ELAC protein 2 isoform X1 [Jatropha curcas]
2 Hb_001541_150 0.0643222024 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001776_020 0.0721596646 - - Protein kinase capable of phosphorylating tyrosine family protein [Populus trichocarpa]
4 Hb_010315_020 0.0800471139 - - PREDICTED: uncharacterized protein LOC105640834 [Jatropha curcas]
5 Hb_002883_030 0.0835179634 - - PREDICTED: uncharacterized protein LOC105638222 [Jatropha curcas]
6 Hb_000336_020 0.0854780526 - - PREDICTED: phospholipid-transporting ATPase 2 [Jatropha curcas]
7 Hb_000212_120 0.0876028653 - - hypothetical protein JCGZ_18070 [Jatropha curcas]
8 Hb_005214_140 0.087686108 - - PREDICTED: transcription factor GTE2-like [Jatropha curcas]
9 Hb_024184_010 0.0877831798 - - PREDICTED: clustered mitochondria protein-like isoform X1 [Citrus sinensis]
10 Hb_000300_270 0.0881118475 - - cationic amino acid transporter, putative [Ricinus communis]
11 Hb_001876_040 0.0883297217 - - PREDICTED: mucin-5B [Jatropha curcas]
12 Hb_003417_040 0.0916092148 transcription factor TF Family: mTERF hypothetical protein JCGZ_10155 [Jatropha curcas]
13 Hb_000230_130 0.0916585957 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Jatropha curcas]
14 Hb_006663_060 0.0917877664 - - PREDICTED: calcium homeostasis endoplasmic reticulum protein [Jatropha curcas]
15 Hb_022250_010 0.0921982772 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
16 Hb_004531_150 0.0924492904 - - PREDICTED: peroxisome biogenesis protein 2 isoform X1 [Jatropha curcas]
17 Hb_003040_050 0.095184786 - - PREDICTED: uncharacterized protein LOC105638219 [Jatropha curcas]
18 Hb_002400_320 0.0954350835 - - conserved hypothetical protein [Ricinus communis]
19 Hb_133702_020 0.0963152268 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_007597_010 0.096668864 - - hypothetical protein B456_010G072300 [Gossypium raimondii]

Gene co-expression network

sample Hb_004531_100 Hb_004531_100 Hb_001541_150 Hb_001541_150 Hb_004531_100--Hb_001541_150 Hb_001776_020 Hb_001776_020 Hb_004531_100--Hb_001776_020 Hb_010315_020 Hb_010315_020 Hb_004531_100--Hb_010315_020 Hb_002883_030 Hb_002883_030 Hb_004531_100--Hb_002883_030 Hb_000336_020 Hb_000336_020 Hb_004531_100--Hb_000336_020 Hb_000212_120 Hb_000212_120 Hb_004531_100--Hb_000212_120 Hb_000300_030 Hb_000300_030 Hb_001541_150--Hb_000300_030 Hb_006663_060 Hb_006663_060 Hb_001541_150--Hb_006663_060 Hb_000270_190 Hb_000270_190 Hb_001541_150--Hb_000270_190 Hb_022250_010 Hb_022250_010 Hb_001541_150--Hb_022250_010 Hb_001541_150--Hb_000336_020 Hb_003498_080 Hb_003498_080 Hb_001776_020--Hb_003498_080 Hb_001481_060 Hb_001481_060 Hb_001776_020--Hb_001481_060 Hb_000212_420 Hb_000212_420 Hb_001776_020--Hb_000212_420 Hb_000103_340 Hb_000103_340 Hb_001776_020--Hb_000103_340 Hb_001776_020--Hb_010315_020 Hb_010315_020--Hb_000212_420 Hb_000066_150 Hb_000066_150 Hb_010315_020--Hb_000066_150 Hb_008014_040 Hb_008014_040 Hb_010315_020--Hb_008014_040 Hb_000588_080 Hb_000588_080 Hb_010315_020--Hb_000588_080 Hb_044486_020 Hb_044486_020 Hb_010315_020--Hb_044486_020 Hb_000345_160 Hb_000345_160 Hb_002883_030--Hb_000345_160 Hb_000300_270 Hb_000300_270 Hb_002883_030--Hb_000300_270 Hb_002897_090 Hb_002897_090 Hb_002883_030--Hb_002897_090 Hb_001662_100 Hb_001662_100 Hb_002883_030--Hb_001662_100 Hb_000049_020 Hb_000049_020 Hb_002883_030--Hb_000049_020 Hb_004037_020 Hb_004037_020 Hb_002883_030--Hb_004037_020 Hb_000996_020 Hb_000996_020 Hb_000336_020--Hb_000996_020 Hb_008397_010 Hb_008397_010 Hb_000336_020--Hb_008397_010 Hb_000529_060 Hb_000529_060 Hb_000336_020--Hb_000529_060 Hb_001856_180 Hb_001856_180 Hb_000336_020--Hb_001856_180 Hb_012055_110 Hb_012055_110 Hb_000336_020--Hb_012055_110 Hb_002849_170 Hb_002849_170 Hb_000336_020--Hb_002849_170 Hb_002774_190 Hb_002774_190 Hb_000212_120--Hb_002774_190 Hb_001876_040 Hb_001876_040 Hb_000212_120--Hb_001876_040 Hb_001157_230 Hb_001157_230 Hb_000212_120--Hb_001157_230 Hb_032202_220 Hb_032202_220 Hb_000212_120--Hb_032202_220 Hb_000061_180 Hb_000061_180 Hb_000212_120--Hb_000061_180 Hb_000212_120--Hb_002883_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.92238 8.3768 7.82753 10.0638 4.71284 5.65697
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.98512 4.51532 2.77248 4.41491 10.8351

CAGE analysis