Hb_010883_140

Information

Type -
Description -
Location Contig10883: 115155-121422
Sequence    

Annotation

kegg
ID rcu:RCOM_1031080
description hypothetical protein
nr
ID XP_012078175.1
description PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID A0A067KCP9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12055 PE=4 SV=1
Gene Ontology
ID GO:0016757
description o-fucosyltransferase family protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02668: 115214-121112 , PASA_asmbl_02669: 115469-121112
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010883_140 0.0 - - PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
2 Hb_074449_010 0.1424153941 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
3 Hb_002541_020 0.1539641013 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
4 Hb_003669_010 0.1672716393 - - PREDICTED: psbP domain-containing protein 5, chloroplastic [Populus euphratica]
5 Hb_002818_050 0.1766766754 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
6 Hb_010655_020 0.1785264048 - - hypothetical protein CICLE_v10032410mg [Citrus clementina]
7 Hb_000074_100 0.1797011737 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000720_080 0.1808770191 - - PREDICTED: bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Jatropha curcas]
9 Hb_003758_020 0.1825900362 - - UGTPg34 [Panax ginseng]
10 Hb_002804_020 0.186229081 - - epsin N-terminal homology domain-containing family protein [Populus trichocarpa]
11 Hb_165279_010 0.1866045234 - - Kiwellin, putative [Ricinus communis]
12 Hb_000086_410 0.1886171054 - - hypothetical protein CISIN_1g0263261mg [Citrus sinensis]
13 Hb_000544_180 0.1896011019 - - PREDICTED: probable auxin efflux carrier component 1c isoform X1 [Jatropha curcas]
14 Hb_000622_350 0.1947523297 - - PREDICTED: protein ABIL1 [Jatropha curcas]
15 Hb_003605_040 0.1977033722 - - PREDICTED: somatic embryogenesis receptor kinase 2 isoform X1 [Jatropha curcas]
16 Hb_007786_030 0.1991285923 - - PREDICTED: ribonucleoside-diphosphate reductase large subunit [Jatropha curcas]
17 Hb_000684_260 0.2001448984 - - PREDICTED: probable DNA helicase MCM8 isoform X2 [Jatropha curcas]
18 Hb_000004_010 0.2027638413 - - hypothetical protein Csa_6G120400 [Cucumis sativus]
19 Hb_000742_190 0.2043599288 - - PREDICTED: histidinol dehydrogenase, chloroplastic isoform X1 [Jatropha curcas]
20 Hb_010942_020 0.2048693257 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_010883_140 Hb_010883_140 Hb_074449_010 Hb_074449_010 Hb_010883_140--Hb_074449_010 Hb_002541_020 Hb_002541_020 Hb_010883_140--Hb_002541_020 Hb_003669_010 Hb_003669_010 Hb_010883_140--Hb_003669_010 Hb_002818_050 Hb_002818_050 Hb_010883_140--Hb_002818_050 Hb_010655_020 Hb_010655_020 Hb_010883_140--Hb_010655_020 Hb_000074_100 Hb_000074_100 Hb_010883_140--Hb_000074_100 Hb_001488_340 Hb_001488_340 Hb_074449_010--Hb_001488_340 Hb_002804_020 Hb_002804_020 Hb_074449_010--Hb_002804_020 Hb_161478_010 Hb_161478_010 Hb_074449_010--Hb_161478_010 Hb_074449_010--Hb_002541_020 Hb_000270_870 Hb_000270_870 Hb_074449_010--Hb_000270_870 Hb_002541_020--Hb_002804_020 Hb_000413_070 Hb_000413_070 Hb_002541_020--Hb_000413_070 Hb_000120_550 Hb_000120_550 Hb_002541_020--Hb_000120_550 Hb_165279_010 Hb_165279_010 Hb_002541_020--Hb_165279_010 Hb_002541_020--Hb_002818_050 Hb_045770_010 Hb_045770_010 Hb_003669_010--Hb_045770_010 Hb_003758_020 Hb_003758_020 Hb_003669_010--Hb_003758_020 Hb_000004_010 Hb_000004_010 Hb_003669_010--Hb_000004_010 Hb_008566_040 Hb_008566_040 Hb_003669_010--Hb_008566_040 Hb_002960_150 Hb_002960_150 Hb_003669_010--Hb_002960_150 Hb_003020_210 Hb_003020_210 Hb_003669_010--Hb_003020_210 Hb_010942_020 Hb_010942_020 Hb_002818_050--Hb_010942_020 Hb_084513_010 Hb_084513_010 Hb_002818_050--Hb_084513_010 Hb_001519_040 Hb_001519_040 Hb_002818_050--Hb_001519_040 Hb_003605_040 Hb_003605_040 Hb_002818_050--Hb_003605_040 Hb_001268_340 Hb_001268_340 Hb_002818_050--Hb_001268_340 Hb_007786_030 Hb_007786_030 Hb_010655_020--Hb_007786_030 Hb_000230_180 Hb_000230_180 Hb_010655_020--Hb_000230_180 Hb_002122_010 Hb_002122_010 Hb_010655_020--Hb_002122_010 Hb_000684_260 Hb_000684_260 Hb_010655_020--Hb_000684_260 Hb_010003_010 Hb_010003_010 Hb_010655_020--Hb_010003_010 Hb_051257_010 Hb_051257_010 Hb_010655_020--Hb_051257_010 Hb_000622_350 Hb_000622_350 Hb_000074_100--Hb_000622_350 Hb_002660_110 Hb_002660_110 Hb_000074_100--Hb_002660_110 Hb_000359_290 Hb_000359_290 Hb_000074_100--Hb_000359_290 Hb_000002_480 Hb_000002_480 Hb_000074_100--Hb_000002_480 Hb_000890_230 Hb_000890_230 Hb_000074_100--Hb_000890_230 Hb_000720_080 Hb_000720_080 Hb_000074_100--Hb_000720_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.16688 1.04337 5.46681 10.9991 2.74374 5.00296
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.82202 1.06527 0.0285596 1.70491 3.02476

CAGE analysis