Hb_165279_010

Information

Type -
Description -
Location Contig165279: 396-896
Sequence    

Annotation

kegg
ID rcu:RCOM_1581450
description Kiwellin, putative
nr
ID XP_002513616.1
description Kiwellin, putative [Ricinus communis]
swissprot
ID Q6H5X0
description Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1
trembl
ID B9RIP7
description Kiwellin, putative OS=Ricinus communis GN=RCOM_1581450 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_165279_010 0.0 - - Kiwellin, putative [Ricinus communis]
2 Hb_002541_020 0.1481221614 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
3 Hb_074449_010 0.1666162455 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
4 Hb_000087_030 0.1691875765 - - hypothetical protein JCGZ_02243 [Jatropha curcas]
5 Hb_003688_090 0.171244592 - - PREDICTED: ATP synthase subunit gamma, mitochondrial [Jatropha curcas]
6 Hb_004117_160 0.1719502577 transcription factor TF Family: B3 B3 domain-containing transcription repressor VAL2 -like protein [Gossypium arboreum]
7 Hb_001014_110 0.1742868668 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
8 Hb_000084_200 0.1825610433 - - PREDICTED: uncharacterized protein LOC105634688 isoform X2 [Jatropha curcas]
9 Hb_004724_460 0.1830964946 - - hypothetical protein EUGRSUZ_L02100 [Eucalyptus grandis]
10 Hb_150023_010 0.1835304979 - - 50S ribosomal protein L2, putative [Ricinus communis]
11 Hb_000086_410 0.184082243 - - hypothetical protein CISIN_1g0263261mg [Citrus sinensis]
12 Hb_000203_230 0.1864290369 - - PREDICTED: probable inactive dual specificity protein phosphatase-like At4g18593 [Jatropha curcas]
13 Hb_010883_140 0.1866045234 - - PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
14 Hb_029904_020 0.1890143649 - - hypothetical protein JCGZ_06227 [Jatropha curcas]
15 Hb_010150_020 0.1891065507 transcription factor TF Family: HMG PREDICTED: FACT complex subunit SSRP1 [Jatropha curcas]
16 Hb_011918_040 0.1905875402 - - PREDICTED: dnaJ protein homolog 2 [Jatropha curcas]
17 Hb_156825_010 0.1922084555 transcription factor TF Family: C2C2-GATA hypothetical protein JCGZ_05054 [Jatropha curcas]
18 Hb_000016_030 0.1938039387 - - PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1 [Jatropha curcas]
19 Hb_000243_160 0.194891516 - - glutaredoxin-1, grx1, putative [Ricinus communis]
20 Hb_002804_020 0.1952474299 - - epsin N-terminal homology domain-containing family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_165279_010 Hb_165279_010 Hb_002541_020 Hb_002541_020 Hb_165279_010--Hb_002541_020 Hb_074449_010 Hb_074449_010 Hb_165279_010--Hb_074449_010 Hb_000087_030 Hb_000087_030 Hb_165279_010--Hb_000087_030 Hb_003688_090 Hb_003688_090 Hb_165279_010--Hb_003688_090 Hb_004117_160 Hb_004117_160 Hb_165279_010--Hb_004117_160 Hb_001014_110 Hb_001014_110 Hb_165279_010--Hb_001014_110 Hb_002804_020 Hb_002804_020 Hb_002541_020--Hb_002804_020 Hb_000413_070 Hb_000413_070 Hb_002541_020--Hb_000413_070 Hb_002541_020--Hb_074449_010 Hb_000120_550 Hb_000120_550 Hb_002541_020--Hb_000120_550 Hb_002818_050 Hb_002818_050 Hb_002541_020--Hb_002818_050 Hb_001488_340 Hb_001488_340 Hb_074449_010--Hb_001488_340 Hb_074449_010--Hb_002804_020 Hb_161478_010 Hb_161478_010 Hb_074449_010--Hb_161478_010 Hb_010883_140 Hb_010883_140 Hb_074449_010--Hb_010883_140 Hb_000270_870 Hb_000270_870 Hb_074449_010--Hb_000270_870 Hb_000051_170 Hb_000051_170 Hb_000087_030--Hb_000051_170 Hb_033363_070 Hb_033363_070 Hb_000087_030--Hb_033363_070 Hb_005714_130 Hb_005714_130 Hb_000087_030--Hb_005714_130 Hb_000130_190 Hb_000130_190 Hb_000087_030--Hb_000130_190 Hb_011671_090 Hb_011671_090 Hb_000087_030--Hb_011671_090 Hb_010150_020 Hb_010150_020 Hb_003688_090--Hb_010150_020 Hb_009049_020 Hb_009049_020 Hb_003688_090--Hb_009049_020 Hb_007951_040 Hb_007951_040 Hb_003688_090--Hb_007951_040 Hb_002073_190 Hb_002073_190 Hb_003688_090--Hb_002073_190 Hb_000035_110 Hb_000035_110 Hb_003688_090--Hb_000035_110 Hb_002398_030 Hb_002398_030 Hb_003688_090--Hb_002398_030 Hb_000107_200 Hb_000107_200 Hb_004117_160--Hb_000107_200 Hb_001948_130 Hb_001948_130 Hb_004117_160--Hb_001948_130 Hb_003010_020 Hb_003010_020 Hb_004117_160--Hb_003010_020 Hb_032050_040 Hb_032050_040 Hb_004117_160--Hb_032050_040 Hb_000022_020 Hb_000022_020 Hb_004117_160--Hb_000022_020 Hb_152202_010 Hb_152202_010 Hb_004117_160--Hb_152202_010 Hb_005527_020 Hb_005527_020 Hb_001014_110--Hb_005527_020 Hb_004157_100 Hb_004157_100 Hb_001014_110--Hb_004157_100 Hb_000004_020 Hb_000004_020 Hb_001014_110--Hb_000004_020 Hb_000676_080 Hb_000676_080 Hb_001014_110--Hb_000676_080 Hb_054745_010 Hb_054745_010 Hb_001014_110--Hb_054745_010 Hb_006541_040 Hb_006541_040 Hb_001014_110--Hb_006541_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.578446 0.275741 0.545554 0.861827 0.391768 1.20395
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.668868 0.210189 0 0.34945 0.589675

CAGE analysis