Hb_000186_170

Information

Type -
Description -
Location Contig186: 236867-246191
Sequence    

Annotation

kegg
ID rcu:RCOM_0903240
description phosphofructokinase, putative (EC:2.7.1.90)
nr
ID AIE47260.1
description pyrophosphate-dependent phosphofructokinase, partial [Hevea brasiliensis]
swissprot
ID Q41141
description Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1
trembl
ID A0A068LQF2
description Pyrophosphate-dependent phosphofructokinase (Fragment) OS=Hevea brasiliensis GN=PFP1 PE=2 SV=1
Gene Ontology
ID GO:0003872
description pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000186_170 0.0 - - pyrophosphate-dependent phosphofructokinase, partial [Hevea brasiliensis]
2 Hb_001689_040 0.1471318701 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 1-like [Jatropha curcas]
3 Hb_177343_010 0.1484451744 - - PREDICTED: uncharacterized protein LOC105650963 [Jatropha curcas]
4 Hb_000613_010 0.1510958093 - - PREDICTED: uncharacterized protein LOC105647991 [Jatropha curcas]
5 Hb_003124_030 0.158236351 - - At4g33625-like protein [Brassica napus]
6 Hb_000172_350 0.1605583369 - - PREDICTED: uncharacterized protein LOC105650963 [Jatropha curcas]
7 Hb_009486_040 0.1629762933 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
8 Hb_114893_040 0.1697219626 transcription factor TF Family: mTERF hypothetical protein JCGZ_10155 [Jatropha curcas]
9 Hb_004218_190 0.1708275978 transcription factor TF Family: SNF2 PREDICTED: F-box protein At3g54460 isoform X1 [Jatropha curcas]
10 Hb_163145_030 0.1714595087 - - PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Jatropha curcas]
11 Hb_010175_030 0.1749102736 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
12 Hb_003025_140 0.1761321628 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000815_230 0.1769259789 - - conserved hypothetical protein [Ricinus communis]
14 Hb_021495_020 0.1782382813 - - chitinase, putative [Ricinus communis]
15 Hb_003632_030 0.1789881885 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
16 Hb_000230_290 0.1809868577 - - protein phosphatase 2c, putative [Ricinus communis]
17 Hb_000453_030 0.1830126765 - - Protein kinase capable of phosphorylating tyrosine family protein [Populus trichocarpa]
18 Hb_000579_240 0.1832251407 - - phosphatidylinositol transporter, putative [Ricinus communis]
19 Hb_001916_090 0.1833894932 - - beta-1,2-n-acetylglucosaminyltransferase II, putative [Ricinus communis]
20 Hb_123676_010 0.1837817716 - - glycine-rich RNA-binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000186_170 Hb_000186_170 Hb_001689_040 Hb_001689_040 Hb_000186_170--Hb_001689_040 Hb_177343_010 Hb_177343_010 Hb_000186_170--Hb_177343_010 Hb_000613_010 Hb_000613_010 Hb_000186_170--Hb_000613_010 Hb_003124_030 Hb_003124_030 Hb_000186_170--Hb_003124_030 Hb_000172_350 Hb_000172_350 Hb_000186_170--Hb_000172_350 Hb_009486_040 Hb_009486_040 Hb_000186_170--Hb_009486_040 Hb_011377_040 Hb_011377_040 Hb_001689_040--Hb_011377_040 Hb_022092_010 Hb_022092_010 Hb_001689_040--Hb_022092_010 Hb_002284_100 Hb_002284_100 Hb_001689_040--Hb_002284_100 Hb_015884_020 Hb_015884_020 Hb_001689_040--Hb_015884_020 Hb_010172_010 Hb_010172_010 Hb_001689_040--Hb_010172_010 Hb_000979_130 Hb_000979_130 Hb_001689_040--Hb_000979_130 Hb_000270_660 Hb_000270_660 Hb_177343_010--Hb_000270_660 Hb_163145_030 Hb_163145_030 Hb_177343_010--Hb_163145_030 Hb_059741_010 Hb_059741_010 Hb_177343_010--Hb_059741_010 Hb_002164_020 Hb_002164_020 Hb_177343_010--Hb_002164_020 Hb_011310_050 Hb_011310_050 Hb_177343_010--Hb_011310_050 Hb_010175_030 Hb_010175_030 Hb_177343_010--Hb_010175_030 Hb_000984_270 Hb_000984_270 Hb_000613_010--Hb_000984_270 Hb_000613_010--Hb_000172_350 Hb_000136_140 Hb_000136_140 Hb_000613_010--Hb_000136_140 Hb_011486_040 Hb_011486_040 Hb_000613_010--Hb_011486_040 Hb_001981_040 Hb_001981_040 Hb_000613_010--Hb_001981_040 Hb_009020_040 Hb_009020_040 Hb_000613_010--Hb_009020_040 Hb_156850_090 Hb_156850_090 Hb_003124_030--Hb_156850_090 Hb_000562_050 Hb_000562_050 Hb_003124_030--Hb_000562_050 Hb_001008_050 Hb_001008_050 Hb_003124_030--Hb_001008_050 Hb_158092_080 Hb_158092_080 Hb_003124_030--Hb_158092_080 Hb_001789_020 Hb_001789_020 Hb_003124_030--Hb_001789_020 Hb_001085_290 Hb_001085_290 Hb_003124_030--Hb_001085_290 Hb_005250_010 Hb_005250_010 Hb_000172_350--Hb_005250_010 Hb_000934_110 Hb_000934_110 Hb_000172_350--Hb_000934_110 Hb_022250_010 Hb_022250_010 Hb_000172_350--Hb_022250_010 Hb_001801_020 Hb_001801_020 Hb_000172_350--Hb_001801_020 Hb_000172_350--Hb_000562_050 Hb_006355_020 Hb_006355_020 Hb_000172_350--Hb_006355_020 Hb_000230_290 Hb_000230_290 Hb_009486_040--Hb_000230_290 Hb_003952_060 Hb_003952_060 Hb_009486_040--Hb_003952_060 Hb_003025_140 Hb_003025_140 Hb_009486_040--Hb_003025_140 Hb_000078_080 Hb_000078_080 Hb_009486_040--Hb_000078_080 Hb_003607_070 Hb_003607_070 Hb_009486_040--Hb_003607_070 Hb_002055_040 Hb_002055_040 Hb_009486_040--Hb_002055_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.10212 0.812467 3.11561 4.36326 1.77263 3.15825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.293551 0.266509 3.26812 2.77091 7.09661

CAGE analysis