Hb_059741_010

Information

Type -
Description -
Location Contig59741: 1305-2926
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa000611mg
description hypothetical protein
nr
ID XP_012076601.1
description PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Jatropha curcas]
swissprot
ID Q9SKJ5
description Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1
trembl
ID A0A067KBT7
description Cellulose synthase OS=Jatropha curcas GN=JCGZ_07183 PE=3 SV=1
Gene Ontology
ID GO:0005886
description cellulose synthase a catalytic subunit 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50402: 2443-2961
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059741_010 0.0 - - PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Jatropha curcas]
2 Hb_011310_050 0.1033119359 - - PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Jatropha curcas]
3 Hb_000679_040 0.1078966524 - - Cellulose synthase 1 [Theobroma cacao]
4 Hb_001216_110 0.1240906314 - - PREDICTED: protein GPR107-like [Jatropha curcas]
5 Hb_000244_260 0.1256232153 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
6 Hb_177343_010 0.1260496748 - - PREDICTED: uncharacterized protein LOC105650963 [Jatropha curcas]
7 Hb_001210_040 0.1276161885 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
8 Hb_009674_050 0.1276861222 - - Endosomal P24A protein precursor, putative [Ricinus communis]
9 Hb_001969_140 0.1278523224 - - PREDICTED: uncharacterized protein LOC105634929 [Jatropha curcas]
10 Hb_000011_220 0.1287465875 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
11 Hb_000167_040 0.1291508785 - - PREDICTED: serine carboxypeptidase-like [Jatropha curcas]
12 Hb_039074_010 0.1351317139 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
13 Hb_000254_070 0.1435286765 - - PREDICTED: protein disulfide isomerase-like 1-6 [Jatropha curcas]
14 Hb_010175_030 0.1440062209 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
15 Hb_001105_130 0.1468860334 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
16 Hb_000684_310 0.1471510132 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
17 Hb_002400_060 0.1503282552 - - PREDICTED: putative clathrin assembly protein At2g25430 [Jatropha curcas]
18 Hb_003371_190 0.1518668546 - - PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
19 Hb_005116_140 0.1523585858 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
20 Hb_002603_040 0.1531253997 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_059741_010 Hb_059741_010 Hb_011310_050 Hb_011310_050 Hb_059741_010--Hb_011310_050 Hb_000679_040 Hb_000679_040 Hb_059741_010--Hb_000679_040 Hb_001216_110 Hb_001216_110 Hb_059741_010--Hb_001216_110 Hb_000244_260 Hb_000244_260 Hb_059741_010--Hb_000244_260 Hb_177343_010 Hb_177343_010 Hb_059741_010--Hb_177343_010 Hb_001210_040 Hb_001210_040 Hb_059741_010--Hb_001210_040 Hb_000167_040 Hb_000167_040 Hb_011310_050--Hb_000167_040 Hb_011310_050--Hb_000679_040 Hb_001969_140 Hb_001969_140 Hb_011310_050--Hb_001969_140 Hb_001195_310 Hb_001195_310 Hb_011310_050--Hb_001195_310 Hb_011310_050--Hb_001216_110 Hb_000679_040--Hb_001216_110 Hb_000679_040--Hb_001195_310 Hb_000679_040--Hb_001969_140 Hb_000254_070 Hb_000254_070 Hb_000679_040--Hb_000254_070 Hb_021576_070 Hb_021576_070 Hb_000679_040--Hb_021576_070 Hb_028639_030 Hb_028639_030 Hb_001216_110--Hb_028639_030 Hb_001216_110--Hb_021576_070 Hb_001216_110--Hb_001969_140 Hb_002129_020 Hb_002129_020 Hb_001216_110--Hb_002129_020 Hb_001216_110--Hb_001195_310 Hb_002072_010 Hb_002072_010 Hb_000244_260--Hb_002072_010 Hb_000244_260--Hb_000254_070 Hb_000244_260--Hb_011310_050 Hb_030565_110 Hb_030565_110 Hb_000244_260--Hb_030565_110 Hb_003058_200 Hb_003058_200 Hb_000244_260--Hb_003058_200 Hb_002026_070 Hb_002026_070 Hb_000244_260--Hb_002026_070 Hb_000270_660 Hb_000270_660 Hb_177343_010--Hb_000270_660 Hb_163145_030 Hb_163145_030 Hb_177343_010--Hb_163145_030 Hb_002164_020 Hb_002164_020 Hb_177343_010--Hb_002164_020 Hb_177343_010--Hb_011310_050 Hb_010175_030 Hb_010175_030 Hb_177343_010--Hb_010175_030 Hb_002400_060 Hb_002400_060 Hb_001210_040--Hb_002400_060 Hb_021297_020 Hb_021297_020 Hb_001210_040--Hb_021297_020 Hb_003340_010 Hb_003340_010 Hb_001210_040--Hb_003340_010 Hb_027445_020 Hb_027445_020 Hb_001210_040--Hb_027445_020 Hb_001801_020 Hb_001801_020 Hb_001210_040--Hb_001801_020 Hb_126976_010 Hb_126976_010 Hb_001210_040--Hb_126976_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.91024 17.2452 20.9407 77.9183 17.5661 19.444
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.01445 2.74167 21.0604 39.3786 69.3624

CAGE analysis