Hb_002026_070

Information

Type -
Description -
Location Contig2026: 57881-68847
Sequence    

Annotation

kegg
ID pvu:PHAVU_002G2910001
description hypothetical protein
nr
ID XP_007160081.1
description hypothetical protein PHAVU_002G2910001g, partial [Phaseolus vulgaris]
swissprot
ID Q8H0S9
description Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana GN=MPA1 PE=2 SV=1
trembl
ID V7CS23
description Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_002G2910001g PE=4 SV=1
Gene Ontology
ID GO:0004177
description puromycin-sensitive aminopeptidase isoform x3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20621: 58756-58957
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002026_070 0.0 - - hypothetical protein PHAVU_002G2910001g, partial [Phaseolus vulgaris]
2 Hb_014497_060 0.0954407542 - - phosphofructokinase, putative [Ricinus communis]
3 Hb_169586_010 0.1066309758 - - Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Theobroma cacao]
4 Hb_000019_170 0.1108829668 - - PREDICTED: alpha-mannosidase [Jatropha curcas]
5 Hb_000922_260 0.1122228916 - - PREDICTED: pantothenate kinase 2 [Jatropha curcas]
6 Hb_000244_260 0.1161827075 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
7 Hb_002232_490 0.1177407255 - - PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Jatropha curcas]
8 Hb_000668_110 0.1177805487 - - PREDICTED: acetyl-CoA carboxylase 1-like [Jatropha curcas]
9 Hb_000337_010 0.1207570032 - - PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
10 Hb_002631_130 0.1227080588 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
11 Hb_003058_200 0.1228695736 - - PREDICTED: dihydropyrimidinase [Populus euphratica]
12 Hb_000330_150 0.12419704 - - PREDICTED: dihydroflavonol-4-reductase-like [Jatropha curcas]
13 Hb_132101_010 0.125962812 - - hypothetical protein B456_007G078100 [Gossypium raimondii]
14 Hb_005181_060 0.1280977012 - - ATP-citrate synthase, putative [Ricinus communis]
15 Hb_098533_010 0.1304155094 - - hypothetical protein L484_003492 [Morus notabilis]
16 Hb_003490_050 0.1305743432 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic [Jatropha curcas]
17 Hb_003125_180 0.1310395055 - - hypothetical protein JCGZ_26440 [Jatropha curcas]
18 Hb_002213_090 0.1317291069 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
19 Hb_085187_010 0.1342074609 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
20 Hb_000157_070 0.1354790152 - - PREDICTED: alpha-N-acetylglucosaminidase [Jatropha curcas]

Gene co-expression network

sample Hb_002026_070 Hb_002026_070 Hb_014497_060 Hb_014497_060 Hb_002026_070--Hb_014497_060 Hb_169586_010 Hb_169586_010 Hb_002026_070--Hb_169586_010 Hb_000019_170 Hb_000019_170 Hb_002026_070--Hb_000019_170 Hb_000922_260 Hb_000922_260 Hb_002026_070--Hb_000922_260 Hb_000244_260 Hb_000244_260 Hb_002026_070--Hb_000244_260 Hb_002232_490 Hb_002232_490 Hb_002026_070--Hb_002232_490 Hb_000256_110 Hb_000256_110 Hb_014497_060--Hb_000256_110 Hb_002902_140 Hb_002902_140 Hb_014497_060--Hb_002902_140 Hb_014497_060--Hb_002232_490 Hb_002631_130 Hb_002631_130 Hb_014497_060--Hb_002631_130 Hb_014497_060--Hb_000922_260 Hb_000330_150 Hb_000330_150 Hb_169586_010--Hb_000330_150 Hb_000940_170 Hb_000940_170 Hb_169586_010--Hb_000940_170 Hb_002928_200 Hb_002928_200 Hb_169586_010--Hb_002928_200 Hb_003058_200 Hb_003058_200 Hb_169586_010--Hb_003058_200 Hb_000768_160 Hb_000768_160 Hb_169586_010--Hb_000768_160 Hb_003125_180 Hb_003125_180 Hb_000019_170--Hb_003125_180 Hb_000019_170--Hb_003058_200 Hb_002072_010 Hb_002072_010 Hb_000019_170--Hb_002072_010 Hb_102763_010 Hb_102763_010 Hb_000019_170--Hb_102763_010 Hb_000823_010 Hb_000823_010 Hb_000019_170--Hb_000823_010 Hb_000157_070 Hb_000157_070 Hb_000019_170--Hb_000157_070 Hb_003490_050 Hb_003490_050 Hb_000922_260--Hb_003490_050 Hb_000668_110 Hb_000668_110 Hb_000922_260--Hb_000668_110 Hb_000922_260--Hb_000256_110 Hb_000922_260--Hb_002232_490 Hb_003549_050 Hb_003549_050 Hb_000922_260--Hb_003549_050 Hb_001405_080 Hb_001405_080 Hb_000922_260--Hb_001405_080 Hb_000244_260--Hb_002072_010 Hb_000254_070 Hb_000254_070 Hb_000244_260--Hb_000254_070 Hb_011310_050 Hb_011310_050 Hb_000244_260--Hb_011310_050 Hb_030565_110 Hb_030565_110 Hb_000244_260--Hb_030565_110 Hb_000244_260--Hb_003058_200 Hb_002232_490--Hb_003490_050 Hb_002392_020 Hb_002392_020 Hb_002232_490--Hb_002392_020 Hb_001226_130 Hb_001226_130 Hb_002232_490--Hb_001226_130 Hb_024570_040 Hb_024570_040 Hb_002232_490--Hb_024570_040 Hb_000109_260 Hb_000109_260 Hb_002232_490--Hb_000109_260 Hb_003490_060 Hb_003490_060 Hb_002232_490--Hb_003490_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.3256 11.8984 17.6232 33.0269 8.48661 10.7072
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.78166 3.2262 5.9905 54.6478 36.4435

CAGE analysis