Hb_001405_080

Information

Type -
Description -
Location Contig1405: 122393-131168
Sequence    

Annotation

kegg
ID rcu:RCOM_0909450
description acylamino-acid-releasing enzyme, putative (EC:3.4.19.1)
nr
ID XP_012069746.1
description PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
swissprot
ID Q8R146
description Acylamino-acid-releasing enzyme OS=Mus musculus GN=Apeh PE=2 SV=3
trembl
ID A0A067KVQ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02264 PE=4 SV=1
Gene Ontology
ID GO:0005634
description acylamino-acid-releasing enzyme-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10965: 122332-131511 , PASA_asmbl_10966: 131160-131485
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001405_080 0.0 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
2 Hb_003549_050 0.0858215161 - - PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Jatropha curcas]
3 Hb_004111_030 0.0938000952 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
4 Hb_004041_030 0.0956158124 - - PREDICTED: mitochondrial substrate carrier family protein C-like isoform X1 [Populus euphratica]
5 Hb_002150_020 0.0986049247 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
6 Hb_052946_010 0.1007287633 - - PREDICTED: uncharacterized protein LOC105639103 [Jatropha curcas]
7 Hb_002811_190 0.1051165732 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
8 Hb_000922_260 0.1071127624 - - PREDICTED: pantothenate kinase 2 [Jatropha curcas]
9 Hb_001143_100 0.1086070045 - - PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Populus euphratica]
10 Hb_001425_010 0.108914262 - - sugar transporter, putative [Ricinus communis]
11 Hb_005571_010 0.1145314436 - - PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Jatropha curcas]
12 Hb_003226_190 0.1177295577 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
13 Hb_005695_080 0.119465179 - - PREDICTED: acetyl-CoA carboxylase 1-like [Jatropha curcas]
14 Hb_002529_090 0.1197447467 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Hevea brasiliensis]
15 Hb_003490_050 0.1215622235 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic [Jatropha curcas]
16 Hb_000731_290 0.1230538809 - - ABC transporter family protein [Hevea brasiliensis]
17 Hb_001105_100 0.1242256973 - - PREDICTED: cathepsin B [Jatropha curcas]
18 Hb_008375_010 0.1246088914 - - PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X3 [Pyrus x bretschneideri]
19 Hb_000256_110 0.1246670199 - - PREDICTED: aspartate aminotransferase, chloroplastic [Jatropha curcas]
20 Hb_000496_130 0.1253067316 - - PREDICTED: fructokinase-1 [Jatropha curcas]

Gene co-expression network

sample Hb_001405_080 Hb_001405_080 Hb_003549_050 Hb_003549_050 Hb_001405_080--Hb_003549_050 Hb_004111_030 Hb_004111_030 Hb_001405_080--Hb_004111_030 Hb_004041_030 Hb_004041_030 Hb_001405_080--Hb_004041_030 Hb_002150_020 Hb_002150_020 Hb_001405_080--Hb_002150_020 Hb_052946_010 Hb_052946_010 Hb_001405_080--Hb_052946_010 Hb_002811_190 Hb_002811_190 Hb_001405_080--Hb_002811_190 Hb_001425_010 Hb_001425_010 Hb_003549_050--Hb_001425_010 Hb_000922_260 Hb_000922_260 Hb_003549_050--Hb_000922_260 Hb_003549_050--Hb_052946_010 Hb_003549_050--Hb_004111_030 Hb_006816_010 Hb_006816_010 Hb_003549_050--Hb_006816_010 Hb_013749_050 Hb_013749_050 Hb_004111_030--Hb_013749_050 Hb_005571_010 Hb_005571_010 Hb_004111_030--Hb_005571_010 Hb_001890_010 Hb_001890_010 Hb_004111_030--Hb_001890_010 Hb_001105_100 Hb_001105_100 Hb_004111_030--Hb_001105_100 Hb_004111_030--Hb_002150_020 Hb_003355_010 Hb_003355_010 Hb_004111_030--Hb_003355_010 Hb_004041_030--Hb_002150_020 Hb_005305_020 Hb_005305_020 Hb_004041_030--Hb_005305_020 Hb_001221_300 Hb_001221_300 Hb_004041_030--Hb_001221_300 Hb_004041_030--Hb_052946_010 Hb_000025_500 Hb_000025_500 Hb_004041_030--Hb_000025_500 Hb_002150_020--Hb_005571_010 Hb_055690_010 Hb_055690_010 Hb_002150_020--Hb_055690_010 Hb_001009_260 Hb_001009_260 Hb_002150_020--Hb_001009_260 Hb_032631_070 Hb_032631_070 Hb_002150_020--Hb_032631_070 Hb_002150_020--Hb_005305_020 Hb_000731_290 Hb_000731_290 Hb_052946_010--Hb_000731_290 Hb_001080_030 Hb_001080_030 Hb_052946_010--Hb_001080_030 Hb_052946_010--Hb_000025_500 Hb_008511_140 Hb_008511_140 Hb_052946_010--Hb_008511_140 Hb_003029_140 Hb_003029_140 Hb_052946_010--Hb_003029_140 Hb_002811_190--Hb_001425_010 Hb_000977_150 Hb_000977_150 Hb_002811_190--Hb_000977_150 Hb_021409_190 Hb_021409_190 Hb_002811_190--Hb_021409_190 Hb_000640_260 Hb_000640_260 Hb_002811_190--Hb_000640_260 Hb_000329_080 Hb_000329_080 Hb_002811_190--Hb_000329_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.508717 2.59595 3.95347 4.06727 0.785498 1.63685
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.21366 1.39382 1.28113 5.36834 10.2753

CAGE analysis