Hb_001105_100

Information

Type -
Description -
Location Contig1105: 50539-57294
Sequence    

Annotation

kegg
ID rcu:RCOM_1341910
description cathepsin B, putative (EC:3.4.22.1)
nr
ID XP_012083054.1
description PREDICTED: cathepsin B [Jatropha curcas]
swissprot
ID Q5R6D1
description Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1
trembl
ID A0A067K985
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14145 PE=3 SV=1
Gene Ontology
ID GO:0004197
description cathepsin b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001105_100 0.0 - - PREDICTED: cathepsin B [Jatropha curcas]
2 Hb_000909_080 0.0797662178 - - PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]
3 Hb_004111_030 0.0866087531 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
4 Hb_055690_010 0.0944072042 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
5 Hb_003440_020 0.0965701517 - - PREDICTED: serine protease SPPA, chloroplastic isoform X2 [Jatropha curcas]
6 Hb_000167_120 0.098454933 - - PREDICTED: U-box domain-containing protein 14 [Jatropha curcas]
7 Hb_001571_060 0.0987302035 - - PREDICTED: uncharacterized protein LOC105643976 [Jatropha curcas]
8 Hb_004957_030 0.0995317912 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
9 Hb_000035_350 0.1008338689 - - PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic [Jatropha curcas]
10 Hb_001307_100 0.1020505973 - - calmodulin binding protein, putative [Ricinus communis]
11 Hb_000358_020 0.102768303 - - PREDICTED: uncharacterized protein C05D11.7-like [Jatropha curcas]
12 Hb_002281_020 0.1038955822 - - PREDICTED: actin-related protein 8 [Jatropha curcas]
13 Hb_002150_020 0.1045285824 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
14 Hb_030736_040 0.1049791902 - - PREDICTED: uncharacterized protein LOC105638926 isoform X1 [Jatropha curcas]
15 Hb_005305_020 0.1068564498 - - PREDICTED: dicarboxylate transporter 1, chloroplastic [Jatropha curcas]
16 Hb_000088_260 0.1083480608 - - PREDICTED: uncharacterized protein LOC105636987 [Jatropha curcas]
17 Hb_001511_090 0.1085155422 - - PREDICTED: uncharacterized protein LOC105645861 [Jatropha curcas]
18 Hb_068804_090 0.1087910579 - - PREDICTED: probable cytosolic oligopeptidase A [Jatropha curcas]
19 Hb_011364_020 0.1088089827 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
20 Hb_004218_180 0.1115653005 - - PREDICTED: flowering time control protein FY isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001105_100 Hb_001105_100 Hb_000909_080 Hb_000909_080 Hb_001105_100--Hb_000909_080 Hb_004111_030 Hb_004111_030 Hb_001105_100--Hb_004111_030 Hb_055690_010 Hb_055690_010 Hb_001105_100--Hb_055690_010 Hb_003440_020 Hb_003440_020 Hb_001105_100--Hb_003440_020 Hb_000167_120 Hb_000167_120 Hb_001105_100--Hb_000167_120 Hb_001571_060 Hb_001571_060 Hb_001105_100--Hb_001571_060 Hb_000358_020 Hb_000358_020 Hb_000909_080--Hb_000358_020 Hb_034083_020 Hb_034083_020 Hb_000909_080--Hb_034083_020 Hb_000909_080--Hb_003440_020 Hb_000909_080--Hb_055690_010 Hb_000365_010 Hb_000365_010 Hb_000909_080--Hb_000365_010 Hb_013749_050 Hb_013749_050 Hb_004111_030--Hb_013749_050 Hb_005571_010 Hb_005571_010 Hb_004111_030--Hb_005571_010 Hb_001890_010 Hb_001890_010 Hb_004111_030--Hb_001890_010 Hb_002150_020 Hb_002150_020 Hb_004111_030--Hb_002150_020 Hb_003355_010 Hb_003355_010 Hb_004111_030--Hb_003355_010 Hb_000585_110 Hb_000585_110 Hb_055690_010--Hb_000585_110 Hb_030736_040 Hb_030736_040 Hb_055690_010--Hb_030736_040 Hb_055690_010--Hb_000358_020 Hb_055690_010--Hb_002150_020 Hb_008375_010 Hb_008375_010 Hb_055690_010--Hb_008375_010 Hb_055690_010--Hb_005571_010 Hb_003440_020--Hb_000358_020 Hb_005218_080 Hb_005218_080 Hb_003440_020--Hb_005218_080 Hb_003440_020--Hb_055690_010 Hb_000890_080 Hb_000890_080 Hb_003440_020--Hb_000890_080 Hb_106890_010 Hb_106890_010 Hb_003440_020--Hb_106890_010 Hb_005181_050 Hb_005181_050 Hb_000167_120--Hb_005181_050 Hb_000844_050 Hb_000844_050 Hb_000167_120--Hb_000844_050 Hb_003124_270 Hb_003124_270 Hb_000167_120--Hb_003124_270 Hb_000025_500 Hb_000025_500 Hb_000167_120--Hb_000025_500 Hb_001998_150 Hb_001998_150 Hb_000167_120--Hb_001998_150 Hb_003680_020 Hb_003680_020 Hb_000167_120--Hb_003680_020 Hb_005015_110 Hb_005015_110 Hb_001571_060--Hb_005015_110 Hb_180378_010 Hb_180378_010 Hb_001571_060--Hb_180378_010 Hb_004218_180 Hb_004218_180 Hb_001571_060--Hb_004218_180 Hb_000666_010 Hb_000666_010 Hb_001571_060--Hb_000666_010 Hb_002486_080 Hb_002486_080 Hb_001571_060--Hb_002486_080 Hb_000535_050 Hb_000535_050 Hb_001571_060--Hb_000535_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.47338 19.6016 22.6649 22.6898 2.89198 10.3702
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.89656 12.8947 9.1922 22.6764 44.1468

CAGE analysis