Hb_000167_120

Information

Type -
Description -
Location Contig167: 91023-95305
Sequence    

Annotation

kegg
ID cit:102621804
description U-box domain-containing protein 14-like
nr
ID XP_012080958.1
description PREDICTED: U-box domain-containing protein 14 [Jatropha curcas]
swissprot
ID Q8VZ40
description U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1
trembl
ID A0A067KDZ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16154 PE=4 SV=1
Gene Ontology
ID GO:0004842
description u-box domain-containing protein 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15408: 91094-94681 , PASA_asmbl_15409: 95060-95161
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000167_120 0.0 - - PREDICTED: U-box domain-containing protein 14 [Jatropha curcas]
2 Hb_005181_050 0.0627098723 - - PREDICTED: phytochrome B isoform X1 [Jatropha curcas]
3 Hb_000844_050 0.075766183 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0723500-like [Jatropha curcas]
4 Hb_003124_270 0.0766643769 transcription factor TF Family: LUG hypothetical protein JCGZ_13223 [Jatropha curcas]
5 Hb_000025_500 0.0829618197 - - Ran GTPase binding protein, putative [Ricinus communis]
6 Hb_001998_150 0.0830298424 - - hypothetical protein JCGZ_09140 [Jatropha curcas]
7 Hb_003680_020 0.0850403819 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_000809_250 0.0873941144 - - PREDICTED: uncharacterized protein LOC105639683 [Jatropha curcas]
9 Hb_001341_010 0.087878315 - - PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic [Jatropha curcas]
10 Hb_004586_090 0.0911970896 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform X1 [Jatropha curcas]
11 Hb_000125_180 0.0954605239 - - PREDICTED: flowering time control protein FPA isoform X1 [Jatropha curcas]
12 Hb_001105_100 0.098454933 - - PREDICTED: cathepsin B [Jatropha curcas]
13 Hb_007313_040 0.0985197037 - - hypothetical protein JCGZ_23401 [Jatropha curcas]
14 Hb_004884_090 0.098869538 - - importin beta-1, putative [Ricinus communis]
15 Hb_003849_280 0.0991984431 - - PREDICTED: uncharacterized protein LOC105644977 [Jatropha curcas]
16 Hb_007012_040 0.0994333704 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 44 [Jatropha curcas]
17 Hb_000484_010 0.1006283546 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 23 [Jatropha curcas]
18 Hb_002609_080 0.1022716566 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like [Jatropha curcas]
19 Hb_013749_050 0.1033437887 - - PREDICTED: uncharacterized protein LOC105647765 isoform X2 [Jatropha curcas]
20 Hb_048476_080 0.1033457294 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]

Gene co-expression network

sample Hb_000167_120 Hb_000167_120 Hb_005181_050 Hb_005181_050 Hb_000167_120--Hb_005181_050 Hb_000844_050 Hb_000844_050 Hb_000167_120--Hb_000844_050 Hb_003124_270 Hb_003124_270 Hb_000167_120--Hb_003124_270 Hb_000025_500 Hb_000025_500 Hb_000167_120--Hb_000025_500 Hb_001998_150 Hb_001998_150 Hb_000167_120--Hb_001998_150 Hb_003680_020 Hb_003680_020 Hb_000167_120--Hb_003680_020 Hb_005181_050--Hb_003124_270 Hb_005181_050--Hb_003680_020 Hb_000125_180 Hb_000125_180 Hb_005181_050--Hb_000125_180 Hb_005181_050--Hb_000844_050 Hb_000809_250 Hb_000809_250 Hb_005181_050--Hb_000809_250 Hb_048476_080 Hb_048476_080 Hb_000844_050--Hb_048476_080 Hb_000844_050--Hb_003124_270 Hb_003661_010 Hb_003661_010 Hb_000844_050--Hb_003661_010 Hb_000844_050--Hb_003680_020 Hb_000844_050--Hb_000809_250 Hb_001507_050 Hb_001507_050 Hb_000844_050--Hb_001507_050 Hb_004884_090 Hb_004884_090 Hb_003124_270--Hb_004884_090 Hb_007012_040 Hb_007012_040 Hb_003124_270--Hb_007012_040 Hb_003124_270--Hb_000809_250 Hb_003124_270--Hb_003680_020 Hb_001221_300 Hb_001221_300 Hb_000025_500--Hb_001221_300 Hb_052946_010 Hb_052946_010 Hb_000025_500--Hb_052946_010 Hb_000025_500--Hb_001998_150 Hb_001341_010 Hb_001341_010 Hb_000025_500--Hb_001341_010 Hb_004041_030 Hb_004041_030 Hb_000025_500--Hb_004041_030 Hb_001998_150--Hb_000809_250 Hb_001998_150--Hb_000844_050 Hb_007313_040 Hb_007313_040 Hb_001998_150--Hb_007313_040 Hb_001998_150--Hb_048476_080 Hb_000960_080 Hb_000960_080 Hb_003680_020--Hb_000960_080 Hb_003680_020--Hb_001507_050 Hb_003680_020--Hb_003661_010 Hb_003680_020--Hb_048476_080 Hb_000059_240 Hb_000059_240 Hb_003680_020--Hb_000059_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.34655 23.228 14.4583 20.123 5.1783 6.65978
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.8761 7.43239 9.32113 21.5307 38.0493

CAGE analysis