Hb_052946_010

Information

Type -
Description -
Location Contig52946: 42143-64474
Sequence    

Annotation

kegg
ID rcu:RCOM_1645120
description pitrilysin, putative (EC:3.4.24.64)
nr
ID XP_012078438.1
description PREDICTED: uncharacterized protein LOC105639103 [Jatropha curcas]
swissprot
ID P31828
description Probable zinc protease PqqL OS=Escherichia coli (strain K12) GN=pqqL PE=3 SV=2
trembl
ID A0A067K8X5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13127 PE=3 SV=1
Gene Ontology
ID GO:0005739
description insulinase (peptidase family m16) family protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47271: 42202-64419
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_052946_010 0.0 - - PREDICTED: uncharacterized protein LOC105639103 [Jatropha curcas]
2 Hb_000731_290 0.0620900566 - - ABC transporter family protein [Hevea brasiliensis]
3 Hb_001080_030 0.0844650601 - - AMP dependent ligase, putative [Ricinus communis]
4 Hb_000025_500 0.0848994351 - - Ran GTPase binding protein, putative [Ricinus communis]
5 Hb_004041_030 0.0911532364 - - PREDICTED: mitochondrial substrate carrier family protein C-like isoform X1 [Populus euphratica]
6 Hb_008511_140 0.0967731104 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105632314 [Jatropha curcas]
7 Hb_003029_140 0.0968811105 - - PREDICTED: pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Jatropha curcas]
8 Hb_001405_080 0.1007287633 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
9 Hb_003549_050 0.1038627222 - - PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Jatropha curcas]
10 Hb_001425_010 0.1050621824 - - sugar transporter, putative [Ricinus communis]
11 Hb_018043_020 0.1056567393 - - PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic [Jatropha curcas]
12 Hb_159809_090 0.1067746314 rubber biosynthesis Gene Name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea brasiliensis]
13 Hb_000404_040 0.1083304634 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001408_120 0.1091132526 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
15 Hb_002150_020 0.1095164494 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_001109_160 0.1097662144 - - DNA binding protein, putative [Ricinus communis]
17 Hb_021409_190 0.1111506955 - - PREDICTED: luminal-binding protein 5-like [Jatropha curcas]
18 Hb_004111_030 0.1111595434 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
19 Hb_013399_090 0.1123775071 - - PREDICTED: phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
20 Hb_001341_010 0.112595824 - - PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_052946_010 Hb_052946_010 Hb_000731_290 Hb_000731_290 Hb_052946_010--Hb_000731_290 Hb_001080_030 Hb_001080_030 Hb_052946_010--Hb_001080_030 Hb_000025_500 Hb_000025_500 Hb_052946_010--Hb_000025_500 Hb_004041_030 Hb_004041_030 Hb_052946_010--Hb_004041_030 Hb_008511_140 Hb_008511_140 Hb_052946_010--Hb_008511_140 Hb_003029_140 Hb_003029_140 Hb_052946_010--Hb_003029_140 Hb_000731_290--Hb_001080_030 Hb_000731_290--Hb_000025_500 Hb_001341_010 Hb_001341_010 Hb_000731_290--Hb_001341_010 Hb_000167_120 Hb_000167_120 Hb_000731_290--Hb_000167_120 Hb_003549_050 Hb_003549_050 Hb_000731_290--Hb_003549_050 Hb_005695_080 Hb_005695_080 Hb_001080_030--Hb_005695_080 Hb_159809_090 Hb_159809_090 Hb_001080_030--Hb_159809_090 Hb_001080_030--Hb_008511_140 Hb_003226_190 Hb_003226_190 Hb_001080_030--Hb_003226_190 Hb_000025_500--Hb_000167_120 Hb_001221_300 Hb_001221_300 Hb_000025_500--Hb_001221_300 Hb_001998_150 Hb_001998_150 Hb_000025_500--Hb_001998_150 Hb_000025_500--Hb_001341_010 Hb_000025_500--Hb_004041_030 Hb_002150_020 Hb_002150_020 Hb_004041_030--Hb_002150_020 Hb_005305_020 Hb_005305_020 Hb_004041_030--Hb_005305_020 Hb_004041_030--Hb_001221_300 Hb_001405_080 Hb_001405_080 Hb_004041_030--Hb_001405_080 Hb_000529_140 Hb_000529_140 Hb_008511_140--Hb_000529_140 Hb_000495_080 Hb_000495_080 Hb_008511_140--Hb_000495_080 Hb_030131_030 Hb_030131_030 Hb_008511_140--Hb_030131_030 Hb_000676_200 Hb_000676_200 Hb_008511_140--Hb_000676_200 Hb_018043_020 Hb_018043_020 Hb_003029_140--Hb_018043_020 Hb_001250_020 Hb_001250_020 Hb_003029_140--Hb_001250_020 Hb_008616_040 Hb_008616_040 Hb_003029_140--Hb_008616_040 Hb_021409_190 Hb_021409_190 Hb_003029_140--Hb_021409_190 Hb_000997_140 Hb_000997_140 Hb_003029_140--Hb_000997_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.07404 19.8782 16.439 19.0253 7.58745 7.32474
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.91854 5.7144 7.94337 24.138 62.2126

CAGE analysis