Hb_000909_080

Information

Type -
Description -
Location Contig909: 122105-126076
Sequence    

Annotation

kegg
ID rcu:RCOM_1425680
description inosine-5-monophosphate dehydrogenase, putative (EC:1.1.1.205)
nr
ID XP_012068529.1
description PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]
swissprot
ID Q9SA34
description Inosine-5'-monophosphate dehydrogenase 2 OS=Arabidopsis thaliana GN=At1g16350 PE=1 SV=1
trembl
ID A0A067L913
description Inosine-5'-monophosphate dehydrogenase OS=Jatropha curcas GN=JCGZ_03791 PE=3 SV=1
Gene Ontology
ID GO:0000166
description inosine-5 -monophosphate dehydrogenase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62104: 122114-126076
cDNA
(Sanger)
(ID:Location)		 018_L17.ab1: 123301-125141 , 039_J10.ab1: 123222-125141

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000909_080 0.0 - - PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]
2 Hb_000358_020 0.0575088062 - - PREDICTED: uncharacterized protein C05D11.7-like [Jatropha curcas]
3 Hb_034083_020 0.0664845644 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003440_020 0.0718762166 - - PREDICTED: serine protease SPPA, chloroplastic isoform X2 [Jatropha curcas]
5 Hb_055690_010 0.0730912117 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
6 Hb_000365_010 0.0788940827 - - hypothetical protein POPTR_0006s10920g [Populus trichocarpa]
7 Hb_001105_100 0.0797662178 - - PREDICTED: cathepsin B [Jatropha curcas]
8 Hb_005218_080 0.0811948029 - - PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_004218_180 0.0874260037 - - PREDICTED: flowering time control protein FY isoform X2 [Jatropha curcas]
10 Hb_000035_260 0.0902748403 - - PREDICTED: probable protein phosphatase 2C 60 [Jatropha curcas]
11 Hb_001159_010 0.0917889619 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001141_240 0.0928519063 - - PREDICTED: folate-biopterin transporter 1, chloroplastic [Jatropha curcas]
13 Hb_002762_110 0.0950569678 - - conserved hypothetical protein [Ricinus communis]
14 Hb_106890_010 0.0954572832 - - PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
15 Hb_011537_060 0.0984719401 - - UPF0061 protein azo1574 [Morus notabilis]
16 Hb_134849_010 0.0995872348 - - ATP synthase subunit d, putative [Ricinus communis]
17 Hb_171718_010 0.0996387374 - - PREDICTED: disease resistance protein At4g27190-like [Eucalyptus grandis]
18 Hb_000035_350 0.0996531961 - - PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic [Jatropha curcas]
19 Hb_030736_040 0.0998393637 - - PREDICTED: uncharacterized protein LOC105638926 isoform X1 [Jatropha curcas]
20 Hb_001975_150 0.1009405863 - - PREDICTED: RINT1-like protein MAG2L [Jatropha curcas]

Gene co-expression network

sample Hb_000909_080 Hb_000909_080 Hb_000358_020 Hb_000358_020 Hb_000909_080--Hb_000358_020 Hb_034083_020 Hb_034083_020 Hb_000909_080--Hb_034083_020 Hb_003440_020 Hb_003440_020 Hb_000909_080--Hb_003440_020 Hb_055690_010 Hb_055690_010 Hb_000909_080--Hb_055690_010 Hb_000365_010 Hb_000365_010 Hb_000909_080--Hb_000365_010 Hb_001105_100 Hb_001105_100 Hb_000909_080--Hb_001105_100 Hb_000358_020--Hb_055690_010 Hb_000358_020--Hb_003440_020 Hb_005218_080 Hb_005218_080 Hb_000358_020--Hb_005218_080 Hb_000035_350 Hb_000035_350 Hb_000358_020--Hb_000035_350 Hb_030736_040 Hb_030736_040 Hb_000358_020--Hb_030736_040 Hb_001159_010 Hb_001159_010 Hb_034083_020--Hb_001159_010 Hb_001951_060 Hb_001951_060 Hb_034083_020--Hb_001951_060 Hb_034083_020--Hb_000358_020 Hb_034083_020--Hb_005218_080 Hb_034083_020--Hb_000365_010 Hb_003440_020--Hb_005218_080 Hb_003440_020--Hb_055690_010 Hb_000890_080 Hb_000890_080 Hb_003440_020--Hb_000890_080 Hb_106890_010 Hb_106890_010 Hb_003440_020--Hb_106890_010 Hb_000585_110 Hb_000585_110 Hb_055690_010--Hb_000585_110 Hb_055690_010--Hb_030736_040 Hb_002150_020 Hb_002150_020 Hb_055690_010--Hb_002150_020 Hb_008375_010 Hb_008375_010 Hb_055690_010--Hb_008375_010 Hb_005571_010 Hb_005571_010 Hb_055690_010--Hb_005571_010 Hb_001301_280 Hb_001301_280 Hb_000365_010--Hb_001301_280 Hb_000365_010--Hb_000358_020 Hb_001141_240 Hb_001141_240 Hb_000365_010--Hb_001141_240 Hb_011224_050 Hb_011224_050 Hb_000365_010--Hb_011224_050 Hb_000365_010--Hb_001951_060 Hb_004111_030 Hb_004111_030 Hb_001105_100--Hb_004111_030 Hb_001105_100--Hb_055690_010 Hb_001105_100--Hb_003440_020 Hb_000167_120 Hb_000167_120 Hb_001105_100--Hb_000167_120 Hb_001571_060 Hb_001571_060 Hb_001105_100--Hb_001571_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.27126 4.36891 6.33195 7.4835 1.74055 2.72434
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.4776 5.44443 3.16476 7.47561 12.1406

CAGE analysis