Hb_000035_350

Information

Type -
Description -
Location Contig35: 359470-368150
Sequence    

Annotation

kegg
ID rcu:RCOM_0920510
description 1,2-diacylglycerol 3-beta-galactosyltransferase, putative
nr
ID XP_012076397.1
description PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic [Jatropha curcas]
swissprot
ID Q9SM44
description Monogalactosyldiacylglycerol synthase, chloroplastic OS=Spinacia oleracea GN=MGD A PE=1 SV=1
trembl
ID A0A067KNV8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07065 PE=4 SV=1
Gene Ontology
ID GO:0009941
description monogalactosyldiacylglycerol chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36440: 359446-367919 , PASA_asmbl_36441: 359731-367919 , PASA_asmbl_36442: 359723-364551
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_350 0.0 - - PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic [Jatropha curcas]
2 Hb_171718_010 0.0622988932 - - PREDICTED: disease resistance protein At4g27190-like [Eucalyptus grandis]
3 Hb_000358_020 0.0717616068 - - PREDICTED: uncharacterized protein C05D11.7-like [Jatropha curcas]
4 Hb_000088_260 0.0837205651 - - PREDICTED: uncharacterized protein LOC105636987 [Jatropha curcas]
5 Hb_000638_130 0.0939008017 - - PREDICTED: SAL1 phosphatase-like [Jatropha curcas]
6 Hb_005218_080 0.0948378098 - - PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic isoform X1 [Jatropha curcas]
7 Hb_030736_040 0.0954559721 - - PREDICTED: uncharacterized protein LOC105638926 isoform X1 [Jatropha curcas]
8 Hb_002762_110 0.0957603515 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001269_620 0.0968091483 - - PREDICTED: magnesium transporter MRS2-1 isoform X1 [Populus euphratica]
10 Hb_001723_060 0.0987884812 rubber biosynthesis Gene Name: Dihydrolipoamide dehydrogenase PREDICTED: LOW QUALITY PROTEIN: dihydrolipoyl dehydrogenase 2, mitochondrial [Populus euphratica]
11 Hb_000365_010 0.0991477353 - - hypothetical protein POPTR_0006s10920g [Populus trichocarpa]
12 Hb_003913_130 0.0993670894 - - histone deacetylase 1, 2 ,3, putative [Ricinus communis]
13 Hb_000909_080 0.0996531961 - - PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]
14 Hb_055690_010 0.0996913113 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
15 Hb_000086_630 0.0997532996 - - PREDICTED: dicarboxylate transporter 2.1, chloroplastic [Jatropha curcas]
16 Hb_158530_020 0.1003112066 - - PREDICTED: aspartic proteinase CDR1 [Jatropha curcas]
17 Hb_001105_100 0.1008338689 - - PREDICTED: cathepsin B [Jatropha curcas]
18 Hb_001571_060 0.1028440951 - - PREDICTED: uncharacterized protein LOC105643976 [Jatropha curcas]
19 Hb_000340_040 0.1030169262 - - PREDICTED: HUA2-like protein 3 isoform X3 [Jatropha curcas]
20 Hb_004218_180 0.1032935633 - - PREDICTED: flowering time control protein FY isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000035_350 Hb_000035_350 Hb_171718_010 Hb_171718_010 Hb_000035_350--Hb_171718_010 Hb_000358_020 Hb_000358_020 Hb_000035_350--Hb_000358_020 Hb_000088_260 Hb_000088_260 Hb_000035_350--Hb_000088_260 Hb_000638_130 Hb_000638_130 Hb_000035_350--Hb_000638_130 Hb_005218_080 Hb_005218_080 Hb_000035_350--Hb_005218_080 Hb_030736_040 Hb_030736_040 Hb_000035_350--Hb_030736_040 Hb_171718_010--Hb_000358_020 Hb_002762_110 Hb_002762_110 Hb_171718_010--Hb_002762_110 Hb_001946_380 Hb_001946_380 Hb_171718_010--Hb_001946_380 Hb_003875_030 Hb_003875_030 Hb_171718_010--Hb_003875_030 Hb_171718_010--Hb_005218_080 Hb_000909_080 Hb_000909_080 Hb_000358_020--Hb_000909_080 Hb_055690_010 Hb_055690_010 Hb_000358_020--Hb_055690_010 Hb_003440_020 Hb_003440_020 Hb_000358_020--Hb_003440_020 Hb_000358_020--Hb_005218_080 Hb_000358_020--Hb_030736_040 Hb_000270_480 Hb_000270_480 Hb_000088_260--Hb_000270_480 Hb_001269_620 Hb_001269_620 Hb_000088_260--Hb_001269_620 Hb_000128_060 Hb_000128_060 Hb_000088_260--Hb_000128_060 Hb_001511_090 Hb_001511_090 Hb_000088_260--Hb_001511_090 Hb_001117_110 Hb_001117_110 Hb_000088_260--Hb_001117_110 Hb_001141_240 Hb_001141_240 Hb_000088_260--Hb_001141_240 Hb_000025_350 Hb_000025_350 Hb_000638_130--Hb_000025_350 Hb_001014_060 Hb_001014_060 Hb_000638_130--Hb_001014_060 Hb_005686_130 Hb_005686_130 Hb_000638_130--Hb_005686_130 Hb_000510_170 Hb_000510_170 Hb_000638_130--Hb_000510_170 Hb_003913_130 Hb_003913_130 Hb_000638_130--Hb_003913_130 Hb_065968_010 Hb_065968_010 Hb_000638_130--Hb_065968_010 Hb_005218_080--Hb_003440_020 Hb_005218_080--Hb_000909_080 Hb_008147_080 Hb_008147_080 Hb_005218_080--Hb_008147_080 Hb_005218_080--Hb_002762_110 Hb_030736_040--Hb_001117_110 Hb_106890_010 Hb_106890_010 Hb_030736_040--Hb_106890_010 Hb_030736_040--Hb_055690_010 Hb_003355_010 Hb_003355_010 Hb_030736_040--Hb_003355_010 Hb_068804_090 Hb_068804_090 Hb_030736_040--Hb_068804_090 Hb_008705_020 Hb_008705_020 Hb_030736_040--Hb_008705_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.55767 8.99481 11.2931 10.9365 1.96547 4.32459
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.18846 7.36147 9.10392 9.52016 18.1848

CAGE analysis