Hb_008147_080

Information

Type -
Description -
Location Contig8147: 53702-56977
Sequence    

Annotation

kegg
ID csv:101219404
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like
nr
ID XP_012088136.1
description PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
swissprot
ID A5UKY4
description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=apgM PE=3 SV=1
trembl
ID A0A067JKE3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25648 PE=4 SV=1
Gene Ontology
ID GO:0046537
description 3-biphosphoglycerate-independent phosphoglycerate mutase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59339: 53402-54852
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008147_080 0.0 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
2 Hb_004644_030 0.0730987724 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
3 Hb_005218_080 0.0815672158 - - PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_008375_010 0.0865944693 - - PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X3 [Pyrus x bretschneideri]
5 Hb_001578_020 0.09216562 - - Protein virR, putative [Ricinus communis]
6 Hb_000388_060 0.093853008 - - fructokinase [Manihot esculenta]
7 Hb_000077_150 0.0951854654 - - PREDICTED: riboflavin synthase [Jatropha curcas]
8 Hb_004339_030 0.0963030585 - - PREDICTED: 7-methylguanosine phosphate-specific 5'-nucleotidase A isoform X2 [Jatropha curcas]
9 Hb_000914_100 0.0978664951 - - unknown [Glycine max]
10 Hb_000008_350 0.0984917214 - - -
11 Hb_010288_060 0.1004165864 - - PREDICTED: dnaJ protein ERDJ3B [Jatropha curcas]
12 Hb_003440_020 0.1018054226 - - PREDICTED: serine protease SPPA, chloroplastic isoform X2 [Jatropha curcas]
13 Hb_001789_200 0.1022818034 - - PREDICTED: sec-independent protein translocase protein TATB, chloroplastic [Jatropha curcas]
14 Hb_055690_010 0.103392437 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
15 Hb_002762_110 0.1044327001 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007441_310 0.10650518 - - PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Jatropha curcas]
17 Hb_000358_020 0.1087695554 - - PREDICTED: uncharacterized protein C05D11.7-like [Jatropha curcas]
18 Hb_003581_290 0.1089073737 - - PREDICTED: UDP-galactose/UDP-glucose transporter 3 [Fragaria vesca subsp. vesca]
19 Hb_097495_010 0.1113543654 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
20 Hb_000909_080 0.1144683781 - - PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_008147_080 Hb_008147_080 Hb_004644_030 Hb_004644_030 Hb_008147_080--Hb_004644_030 Hb_005218_080 Hb_005218_080 Hb_008147_080--Hb_005218_080 Hb_008375_010 Hb_008375_010 Hb_008147_080--Hb_008375_010 Hb_001578_020 Hb_001578_020 Hb_008147_080--Hb_001578_020 Hb_000388_060 Hb_000388_060 Hb_008147_080--Hb_000388_060 Hb_000077_150 Hb_000077_150 Hb_008147_080--Hb_000077_150 Hb_002762_110 Hb_002762_110 Hb_004644_030--Hb_002762_110 Hb_004644_030--Hb_000077_150 Hb_000622_290 Hb_000622_290 Hb_004644_030--Hb_000622_290 Hb_003053_110 Hb_003053_110 Hb_004644_030--Hb_003053_110 Hb_004644_030--Hb_001578_020 Hb_000358_020 Hb_000358_020 Hb_005218_080--Hb_000358_020 Hb_003440_020 Hb_003440_020 Hb_005218_080--Hb_003440_020 Hb_000909_080 Hb_000909_080 Hb_005218_080--Hb_000909_080 Hb_171718_010 Hb_171718_010 Hb_005218_080--Hb_171718_010 Hb_005218_080--Hb_002762_110 Hb_007441_310 Hb_007441_310 Hb_008375_010--Hb_007441_310 Hb_055690_010 Hb_055690_010 Hb_008375_010--Hb_055690_010 Hb_000585_110 Hb_000585_110 Hb_008375_010--Hb_000585_110 Hb_002075_030 Hb_002075_030 Hb_008375_010--Hb_002075_030 Hb_000008_350 Hb_000008_350 Hb_008375_010--Hb_000008_350 Hb_004440_060 Hb_004440_060 Hb_001578_020--Hb_004440_060 Hb_055619_010 Hb_055619_010 Hb_001578_020--Hb_055619_010 Hb_007534_050 Hb_007534_050 Hb_001578_020--Hb_007534_050 Hb_002811_010 Hb_002811_010 Hb_001578_020--Hb_002811_010 Hb_001789_200 Hb_001789_200 Hb_000388_060--Hb_001789_200 Hb_002053_010 Hb_002053_010 Hb_000388_060--Hb_002053_010 Hb_000983_070 Hb_000983_070 Hb_000388_060--Hb_000983_070 Hb_001124_180 Hb_001124_180 Hb_000388_060--Hb_001124_180 Hb_001898_180 Hb_001898_180 Hb_000388_060--Hb_001898_180 Hb_000077_150--Hb_002762_110 Hb_001214_050 Hb_001214_050 Hb_000077_150--Hb_001214_050 Hb_003106_190 Hb_003106_190 Hb_000077_150--Hb_003106_190 Hb_002078_340 Hb_002078_340 Hb_000077_150--Hb_002078_340 Hb_000077_150--Hb_002811_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.00658 1.23237 4.18745 5.2499 1.13722 1.58574
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.00309 3.24829 2.42484 4.998 9.32181

CAGE analysis