Hb_004644_030

Information

Type -
Description -
Location Contig4644: 41919-58568
Sequence    

Annotation

kegg
ID rcu:RCOM_1354290
description molybdopterin-binding, putative
nr
ID XP_012082439.1
description PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
swissprot
ID O74841
description Probable FAD synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1235.04c PE=3 SV=1
trembl
ID A0A067KA60
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16559 PE=4 SV=1
Gene Ontology
ID GO:0003824
description fad synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43911: 42203-42979 , PASA_asmbl_43912: 47975-48363 , PASA_asmbl_43913: 47169-58566 , PASA_asmbl_43914: 49091-57790
cDNA
(Sanger)
(ID:Location)		 018_K04.ab1: 49132-57956 , 040_I19.ab1: 49132-57985

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004644_030 0.0 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
2 Hb_002762_110 0.0548459788 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000077_150 0.0611242984 - - PREDICTED: riboflavin synthase [Jatropha curcas]
4 Hb_000622_290 0.0714811152 - - PREDICTED: F-box/kelch-repeat protein At3g61590 [Jatropha curcas]
5 Hb_008147_080 0.0730987724 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
6 Hb_003053_110 0.074238341 - - PREDICTED: protease Do-like 1, chloroplastic [Jatropha curcas]
7 Hb_001578_020 0.0776624038 - - Protein virR, putative [Ricinus communis]
8 Hb_001195_770 0.079621748 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Jatropha curcas]
9 Hb_000107_430 0.0810234523 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Jatropha curcas]
10 Hb_004440_060 0.0868663521 - - aldose 1-epimerase, putative [Ricinus communis]
11 Hb_008705_020 0.0893829753 - - PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468 homolog isoform X1 [Jatropha curcas]
12 Hb_001195_450 0.0899051952 - - PREDICTED: uncharacterized protein LOC105633771 [Jatropha curcas]
13 Hb_012150_030 0.0906848034 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
14 Hb_000364_050 0.0908109427 - - PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
15 Hb_001369_790 0.0914928607 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic [Jatropha curcas]
16 Hb_000167_110 0.0919084933 - - glycerol-3-phosphate dehydrogenase, putative [Ricinus communis]
17 Hb_002078_340 0.0919296652 - - PREDICTED: uncharacterized protein LOC105644820 isoform X2 [Jatropha curcas]
18 Hb_007192_030 0.0928266972 - - PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Jatropha curcas]
19 Hb_001789_200 0.0932078577 - - PREDICTED: sec-independent protein translocase protein TATB, chloroplastic [Jatropha curcas]
20 Hb_005218_080 0.0947984941 - - PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004644_030 Hb_004644_030 Hb_002762_110 Hb_002762_110 Hb_004644_030--Hb_002762_110 Hb_000077_150 Hb_000077_150 Hb_004644_030--Hb_000077_150 Hb_000622_290 Hb_000622_290 Hb_004644_030--Hb_000622_290 Hb_008147_080 Hb_008147_080 Hb_004644_030--Hb_008147_080 Hb_003053_110 Hb_003053_110 Hb_004644_030--Hb_003053_110 Hb_001578_020 Hb_001578_020 Hb_004644_030--Hb_001578_020 Hb_002762_110--Hb_000622_290 Hb_000107_430 Hb_000107_430 Hb_002762_110--Hb_000107_430 Hb_002762_110--Hb_003053_110 Hb_002762_110--Hb_000077_150 Hb_001214_050 Hb_001214_050 Hb_002762_110--Hb_001214_050 Hb_000077_150--Hb_001214_050 Hb_003106_190 Hb_003106_190 Hb_000077_150--Hb_003106_190 Hb_002078_340 Hb_002078_340 Hb_000077_150--Hb_002078_340 Hb_002811_010 Hb_002811_010 Hb_000077_150--Hb_002811_010 Hb_007192_030 Hb_007192_030 Hb_000622_290--Hb_007192_030 Hb_001946_380 Hb_001946_380 Hb_000622_290--Hb_001946_380 Hb_000622_290--Hb_000107_430 Hb_001369_790 Hb_001369_790 Hb_000622_290--Hb_001369_790 Hb_005218_080 Hb_005218_080 Hb_008147_080--Hb_005218_080 Hb_008375_010 Hb_008375_010 Hb_008147_080--Hb_008375_010 Hb_008147_080--Hb_001578_020 Hb_000388_060 Hb_000388_060 Hb_008147_080--Hb_000388_060 Hb_008147_080--Hb_000077_150 Hb_012150_030 Hb_012150_030 Hb_003053_110--Hb_012150_030 Hb_000941_100 Hb_000941_100 Hb_003053_110--Hb_000941_100 Hb_008705_020 Hb_008705_020 Hb_003053_110--Hb_008705_020 Hb_001195_770 Hb_001195_770 Hb_003053_110--Hb_001195_770 Hb_007741_110 Hb_007741_110 Hb_003053_110--Hb_007741_110 Hb_134849_010 Hb_134849_010 Hb_003053_110--Hb_134849_010 Hb_004440_060 Hb_004440_060 Hb_001578_020--Hb_004440_060 Hb_055619_010 Hb_055619_010 Hb_001578_020--Hb_055619_010 Hb_007534_050 Hb_007534_050 Hb_001578_020--Hb_007534_050 Hb_001578_020--Hb_002811_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.35203 3.23622 9.29329 10.0041 2.58036 4.34548
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.31969 7.49192 6.07213 7.6534 18.3515

CAGE analysis