Hb_000977_150

Information

Type -
Description -
Location Contig977: 122622-132028
Sequence    

Annotation

kegg
ID rcu:RCOM_1076760
description beta-glucosidase, putative (EC:3.2.1.21)
nr
ID AAP51059.1
description latex cyanogenic beta glucosidase [Hevea brasiliensis]
swissprot
ID Q9FIW4
description Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1
trembl
ID Q7Y073
description Beta-glucosidase OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0005829
description beta-glucosidase 42

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64162: 125557-125730 , PASA_asmbl_64165: 127476-128463 , PASA_asmbl_64167: 130074-130770
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000977_150 0.0 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
2 Hb_000032_600 0.0919513586 - - PREDICTED: B2 protein [Jatropha curcas]
3 Hb_001054_060 0.092583351 - - PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Jatropha curcas]
4 Hb_002811_190 0.1025424513 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
5 Hb_067664_010 0.1036411341 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
6 Hb_000329_080 0.1102107175 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
7 Hb_001195_370 0.1161066092 - - -
8 Hb_005695_080 0.1223364548 - - PREDICTED: acetyl-CoA carboxylase 1-like [Jatropha curcas]
9 Hb_000997_290 0.1225590495 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
10 Hb_011609_210 0.1269765884 - - Uncharacterized protein TCM_011393 [Theobroma cacao]
11 Hb_001969_130 0.1276188854 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
12 Hb_030312_030 0.129686428 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
13 Hb_000130_200 0.1298027553 - - PREDICTED: putative serine/threonine-protein kinase isoform X3 [Jatropha curcas]
14 Hb_001405_080 0.1323144212 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
15 Hb_001865_010 0.1330454968 transcription factor TF Family: B3 hypothetical protein RCOM_0465210 [Ricinus communis]
16 Hb_004041_030 0.1383725932 - - PREDICTED: mitochondrial substrate carrier family protein C-like isoform X1 [Populus euphratica]
17 Hb_001811_080 0.1396015155 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
18 Hb_003778_020 0.1432639503 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
19 Hb_001124_140 0.1448053898 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
20 Hb_001365_010 0.144833172 - - hypothetical protein JCGZ_02762 [Jatropha curcas]

Gene co-expression network

sample Hb_000977_150 Hb_000977_150 Hb_000032_600 Hb_000032_600 Hb_000977_150--Hb_000032_600 Hb_001054_060 Hb_001054_060 Hb_000977_150--Hb_001054_060 Hb_002811_190 Hb_002811_190 Hb_000977_150--Hb_002811_190 Hb_067664_010 Hb_067664_010 Hb_000977_150--Hb_067664_010 Hb_000329_080 Hb_000329_080 Hb_000977_150--Hb_000329_080 Hb_001195_370 Hb_001195_370 Hb_000977_150--Hb_001195_370 Hb_000032_600--Hb_067664_010 Hb_000032_600--Hb_001054_060 Hb_178968_080 Hb_178968_080 Hb_000032_600--Hb_178968_080 Hb_000130_200 Hb_000130_200 Hb_000032_600--Hb_000130_200 Hb_001754_120 Hb_001754_120 Hb_000032_600--Hb_001754_120 Hb_187959_010 Hb_187959_010 Hb_001054_060--Hb_187959_010 Hb_001054_060--Hb_067664_010 Hb_030312_030 Hb_030312_030 Hb_001054_060--Hb_030312_030 Hb_000997_320 Hb_000997_320 Hb_001054_060--Hb_000997_320 Hb_001425_010 Hb_001425_010 Hb_002811_190--Hb_001425_010 Hb_001405_080 Hb_001405_080 Hb_002811_190--Hb_001405_080 Hb_021409_190 Hb_021409_190 Hb_002811_190--Hb_021409_190 Hb_000640_260 Hb_000640_260 Hb_002811_190--Hb_000640_260 Hb_002811_190--Hb_000329_080 Hb_067664_010--Hb_001754_120 Hb_000997_290 Hb_000997_290 Hb_067664_010--Hb_000997_290 Hb_001124_140 Hb_001124_140 Hb_067664_010--Hb_001124_140 Hb_001365_010 Hb_001365_010 Hb_000329_080--Hb_001365_010 Hb_000163_110 Hb_000163_110 Hb_000329_080--Hb_000163_110 Hb_000329_080--Hb_001195_370 Hb_000300_680 Hb_000300_680 Hb_000329_080--Hb_000300_680 Hb_001811_080 Hb_001811_080 Hb_000329_080--Hb_001811_080 Hb_001195_370--Hb_030312_030 Hb_001195_370--Hb_000997_290 Hb_001195_370--Hb_000997_320 Hb_000366_030 Hb_000366_030 Hb_001195_370--Hb_000366_030 Hb_001080_150 Hb_001080_150 Hb_001195_370--Hb_001080_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0412539 0.521041 0.56291 0.648097 0.0348147 0.0751264
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.134739 0.127211 0.160067 0.684379 1.82768

CAGE analysis