Hb_000366_030

Information

Type -
Description -
Location Contig366: 25255-28303
Sequence    

Annotation

kegg
ID rcu:RCOM_0223350
description alcohol dehydrogenase, putative (EC:1.3.1.74)
nr
ID XP_012078778.1
description PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Jatropha curcas]
swissprot
ID Q39172
description NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1
trembl
ID A0A067KBL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13323 PE=4 SV=1
Gene Ontology
ID GO:0008270
description 2-alkenal reductase (nadp(+)-dependent)-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37668: 18941-28143
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000366_030 0.0 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Jatropha curcas]
2 Hb_001195_370 0.1067690397 - - -
3 Hb_000757_020 0.1282378372 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
4 Hb_001969_130 0.1329786386 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
5 Hb_049293_010 0.1349688122 - - kinase, putative [Ricinus communis]
6 Hb_000731_290 0.1429785289 - - ABC transporter family protein [Hevea brasiliensis]
7 Hb_011174_080 0.143030338 - - PREDICTED: sulfite oxidase [Jatropha curcas]
8 Hb_003687_010 0.1442683262 - - Cysteine-rich RLK 29, putative [Theobroma cacao]
9 Hb_000019_010 0.1473156247 - - PREDICTED: long chain base biosynthesis protein 2a [Jatropha curcas]
10 Hb_182651_020 0.1492114893 - - alcohol dehydrogenase, putative [Ricinus communis]
11 Hb_030312_030 0.1493874581 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
12 Hb_000997_290 0.1504267917 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
13 Hb_025045_010 0.1513620286 - - catalytic, putative [Ricinus communis]
14 Hb_002110_090 0.1527718996 - - PREDICTED: transport inhibitor response 1-like protein [Jatropha curcas]
15 Hb_005695_080 0.1544719343 - - PREDICTED: acetyl-CoA carboxylase 1-like [Jatropha curcas]
16 Hb_000977_150 0.1554716633 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
17 Hb_001080_150 0.1555545393 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
18 Hb_003177_090 0.1570428329 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
19 Hb_000221_180 0.1571397317 - - VQ motif-containing family protein [Populus trichocarpa]
20 Hb_011609_210 0.1611965454 - - Uncharacterized protein TCM_011393 [Theobroma cacao]

Gene co-expression network

sample Hb_000366_030 Hb_000366_030 Hb_001195_370 Hb_001195_370 Hb_000366_030--Hb_001195_370 Hb_000757_020 Hb_000757_020 Hb_000366_030--Hb_000757_020 Hb_001969_130 Hb_001969_130 Hb_000366_030--Hb_001969_130 Hb_049293_010 Hb_049293_010 Hb_000366_030--Hb_049293_010 Hb_000731_290 Hb_000731_290 Hb_000366_030--Hb_000731_290 Hb_011174_080 Hb_011174_080 Hb_000366_030--Hb_011174_080 Hb_030312_030 Hb_030312_030 Hb_001195_370--Hb_030312_030 Hb_000997_290 Hb_000997_290 Hb_001195_370--Hb_000997_290 Hb_000329_080 Hb_000329_080 Hb_001195_370--Hb_000329_080 Hb_000997_320 Hb_000997_320 Hb_001195_370--Hb_000997_320 Hb_001080_150 Hb_001080_150 Hb_001195_370--Hb_001080_150 Hb_000757_020--Hb_049293_010 Hb_003177_090 Hb_003177_090 Hb_000757_020--Hb_003177_090 Hb_000418_150 Hb_000418_150 Hb_000757_020--Hb_000418_150 Hb_155150_010 Hb_155150_010 Hb_000757_020--Hb_155150_010 Hb_000714_120 Hb_000714_120 Hb_000757_020--Hb_000714_120 Hb_000665_200 Hb_000665_200 Hb_001969_130--Hb_000665_200 Hb_001124_140 Hb_001124_140 Hb_001969_130--Hb_001124_140 Hb_002026_030 Hb_002026_030 Hb_001969_130--Hb_002026_030 Hb_022425_050 Hb_022425_050 Hb_001969_130--Hb_022425_050 Hb_000066_040 Hb_000066_040 Hb_001969_130--Hb_000066_040 Hb_001221_300 Hb_001221_300 Hb_001969_130--Hb_001221_300 Hb_049293_010--Hb_003177_090 Hb_000251_050 Hb_000251_050 Hb_049293_010--Hb_000251_050 Hb_049293_010--Hb_001195_370 Hb_049293_010--Hb_000418_150 Hb_052946_010 Hb_052946_010 Hb_000731_290--Hb_052946_010 Hb_001080_030 Hb_001080_030 Hb_000731_290--Hb_001080_030 Hb_000025_500 Hb_000025_500 Hb_000731_290--Hb_000025_500 Hb_001341_010 Hb_001341_010 Hb_000731_290--Hb_001341_010 Hb_000167_120 Hb_000167_120 Hb_000731_290--Hb_000167_120 Hb_003549_050 Hb_003549_050 Hb_000731_290--Hb_003549_050 Hb_001235_130 Hb_001235_130 Hb_011174_080--Hb_001235_130 Hb_000157_140 Hb_000157_140 Hb_011174_080--Hb_000157_140 Hb_002805_090 Hb_002805_090 Hb_011174_080--Hb_002805_090 Hb_000256_160 Hb_000256_160 Hb_011174_080--Hb_000256_160 Hb_029879_120 Hb_029879_120 Hb_011174_080--Hb_029879_120 Hb_001702_050 Hb_001702_050 Hb_011174_080--Hb_001702_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.17785 6.65667 4.01007 7.18725 0.378427 2.28548
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.07898 0.808196 0.222975 5.85181 16.1075

CAGE analysis