Hb_000757_020

Information

Type -
Description -
Location Contig757: 18791-25159
Sequence    

Annotation

kegg
ID rcu:RCOM_1333600
description synaptotagmin, putative
nr
ID XP_012075480.1
description PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
swissprot
ID B8XCH5
description Protein QUIRKY OS=Arabidopsis thaliana GN=QKY PE=2 SV=1
trembl
ID A0A067KG46
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10949 PE=4 SV=1
Gene Ontology
ID GO:0009506
description multiple c2 and transmembrane domain-containing protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57058: 21941-25613
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000757_020 0.0 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Jatropha curcas]
2 Hb_049293_010 0.0782835676 - - kinase, putative [Ricinus communis]
3 Hb_003177_090 0.1050375082 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
4 Hb_000418_150 0.1065724017 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_155150_010 0.1089183893 - - kinase, putative [Ricinus communis]
6 Hb_000714_120 0.1186460447 - - PREDICTED: vacuolar-sorting receptor 6-like [Jatropha curcas]
7 Hb_000366_030 0.1282378372 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Jatropha curcas]
8 Hb_083242_020 0.1332337925 - - hypothetical protein JCGZ_20097 [Jatropha curcas]
9 Hb_001496_120 0.1427106157 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
10 Hb_000438_020 0.1454764284 - - leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
11 Hb_002110_090 0.1519606979 - - PREDICTED: transport inhibitor response 1-like protein [Jatropha curcas]
12 Hb_000251_050 0.1522720152 - - hypothetical protein JCGZ_21678 [Jatropha curcas]
13 Hb_002099_060 0.1524609124 - - Protein AFR, putative [Ricinus communis]
14 Hb_029748_020 0.1536808408 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic isoform X1 [Jatropha curcas]
15 Hb_004864_020 0.1543178878 - - Polyprotein, putative [Solanum demissum]
16 Hb_003517_090 0.1567154435 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
17 Hb_006040_170 0.1574667513 - - NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
18 Hb_001195_250 0.1597695672 - - lrr receptor protein kinase, putative [Ricinus communis]
19 Hb_000221_180 0.161940122 - - VQ motif-containing family protein [Populus trichocarpa]
20 Hb_000237_160 0.1622315295 - - BEL1-like homeodomain protein 1 [Morus notabilis]

Gene co-expression network

sample Hb_000757_020 Hb_000757_020 Hb_049293_010 Hb_049293_010 Hb_000757_020--Hb_049293_010 Hb_003177_090 Hb_003177_090 Hb_000757_020--Hb_003177_090 Hb_000418_150 Hb_000418_150 Hb_000757_020--Hb_000418_150 Hb_155150_010 Hb_155150_010 Hb_000757_020--Hb_155150_010 Hb_000714_120 Hb_000714_120 Hb_000757_020--Hb_000714_120 Hb_000366_030 Hb_000366_030 Hb_000757_020--Hb_000366_030 Hb_049293_010--Hb_003177_090 Hb_000251_050 Hb_000251_050 Hb_049293_010--Hb_000251_050 Hb_001195_370 Hb_001195_370 Hb_049293_010--Hb_001195_370 Hb_049293_010--Hb_000366_030 Hb_049293_010--Hb_000418_150 Hb_006040_170 Hb_006040_170 Hb_003177_090--Hb_006040_170 Hb_001689_030 Hb_001689_030 Hb_003177_090--Hb_001689_030 Hb_002344_080 Hb_002344_080 Hb_003177_090--Hb_002344_080 Hb_003177_090--Hb_000418_150 Hb_143629_200 Hb_143629_200 Hb_003177_090--Hb_143629_200 Hb_000438_020 Hb_000438_020 Hb_000418_150--Hb_000438_020 Hb_004864_020 Hb_004864_020 Hb_000418_150--Hb_004864_020 Hb_001496_120 Hb_001496_120 Hb_000418_150--Hb_001496_120 Hb_002099_060 Hb_002099_060 Hb_000418_150--Hb_002099_060 Hb_001446_060 Hb_001446_060 Hb_155150_010--Hb_001446_060 Hb_029748_020 Hb_029748_020 Hb_155150_010--Hb_029748_020 Hb_001898_020 Hb_001898_020 Hb_155150_010--Hb_001898_020 Hb_000321_120 Hb_000321_120 Hb_155150_010--Hb_000321_120 Hb_155150_010--Hb_000438_020 Hb_000714_120--Hb_004864_020 Hb_000714_120--Hb_003177_090 Hb_000714_120--Hb_002099_060 Hb_002110_090 Hb_002110_090 Hb_000714_120--Hb_002110_090 Hb_000714_120--Hb_000418_150 Hb_000366_030--Hb_001195_370 Hb_001969_130 Hb_001969_130 Hb_000366_030--Hb_001969_130 Hb_000731_290 Hb_000731_290 Hb_000366_030--Hb_000731_290 Hb_011174_080 Hb_011174_080 Hb_000366_030--Hb_011174_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.47028 40.2401 11.7997 34.3688 2.97081 7.22794
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.37557 0.560585 0.593077 31.9291 65.751

CAGE analysis