Hb_029748_020

Information

Type -
Description -
Location Contig29748: 51121-59331
Sequence    

Annotation

kegg
ID rcu:RCOM_0306870
description Ent-kaurene synthase B, chloroplast precursor, putative (EC:4.2.3.19)
nr
ID XP_012068527.1
description PREDICTED: ent-kaur-16-ene synthase, chloroplastic isoform X1 [Jatropha curcas]
swissprot
ID Q39548
description Ent-kaur-16-ene synthase, chloroplastic OS=Cucurbita maxima PE=1 SV=1
trembl
ID A0A067LA52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03790 PE=4 SV=1
Gene Ontology
ID GO:0000287
description ent-kaur-16-ene chloroplastic isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31151: 51034-51533 , PASA_asmbl_31152: 51538-54458 , PASA_asmbl_31153: 54675-60071
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029748_020 0.0 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic isoform X1 [Jatropha curcas]
2 Hb_000100_210 0.0971551398 - - PREDICTED: selenium-binding protein 1-like [Jatropha curcas]
3 Hb_000321_120 0.0988274736 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
4 Hb_001522_040 0.0988615792 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
5 Hb_002099_060 0.1032284088 - - Protein AFR, putative [Ricinus communis]
6 Hb_000438_020 0.11256622 - - leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
7 Hb_155150_010 0.1140610759 - - kinase, putative [Ricinus communis]
8 Hb_004864_020 0.1148430099 - - Polyprotein, putative [Solanum demissum]
9 Hb_167775_010 0.1171882284 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
10 Hb_000418_150 0.1244197431 - - ABC transporter family protein [Hevea brasiliensis]
11 Hb_005724_040 0.1260919142 - - hypothetical protein JCGZ_13142 [Jatropha curcas]
12 Hb_002686_210 0.1272307219 - - zinc finger protein, putative [Ricinus communis]
13 Hb_001898_020 0.1273517375 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
14 Hb_003912_080 0.1287508532 - - PREDICTED: LOW QUALITY PROTEIN: ultraviolet-B receptor UVR8 [Jatropha curcas]
15 Hb_052117_010 0.1290080661 - - kinase, putative [Ricinus communis]
16 Hb_002909_100 0.1324883448 - - PREDICTED: uncharacterized protein LOC105648153 [Jatropha curcas]
17 Hb_002740_100 0.1333991293 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
18 Hb_002888_040 0.13393095 - - hypothetical protein B456_009G267200 [Gossypium raimondii]
19 Hb_001446_060 0.1352488031 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
20 Hb_001408_020 0.1375873589 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_029748_020 Hb_029748_020 Hb_000100_210 Hb_000100_210 Hb_029748_020--Hb_000100_210 Hb_000321_120 Hb_000321_120 Hb_029748_020--Hb_000321_120 Hb_001522_040 Hb_001522_040 Hb_029748_020--Hb_001522_040 Hb_002099_060 Hb_002099_060 Hb_029748_020--Hb_002099_060 Hb_000438_020 Hb_000438_020 Hb_029748_020--Hb_000438_020 Hb_155150_010 Hb_155150_010 Hb_029748_020--Hb_155150_010 Hb_000100_210--Hb_001522_040 Hb_002833_020 Hb_002833_020 Hb_000100_210--Hb_002833_020 Hb_000997_340 Hb_000997_340 Hb_000100_210--Hb_000997_340 Hb_023386_050 Hb_023386_050 Hb_000100_210--Hb_023386_050 Hb_002686_210 Hb_002686_210 Hb_000100_210--Hb_002686_210 Hb_000340_360 Hb_000340_360 Hb_000321_120--Hb_000340_360 Hb_000221_180 Hb_000221_180 Hb_000321_120--Hb_000221_180 Hb_000175_270 Hb_000175_270 Hb_000321_120--Hb_000175_270 Hb_013399_090 Hb_013399_090 Hb_000321_120--Hb_013399_090 Hb_001269_050 Hb_001269_050 Hb_000321_120--Hb_001269_050 Hb_052117_010 Hb_052117_010 Hb_001522_040--Hb_052117_010 Hb_009745_010 Hb_009745_010 Hb_001522_040--Hb_009745_010 Hb_001898_020 Hb_001898_020 Hb_001522_040--Hb_001898_020 Hb_002685_030 Hb_002685_030 Hb_001522_040--Hb_002685_030 Hb_002099_060--Hb_000438_020 Hb_005724_040 Hb_005724_040 Hb_002099_060--Hb_005724_040 Hb_004864_020 Hb_004864_020 Hb_002099_060--Hb_004864_020 Hb_000181_230 Hb_000181_230 Hb_002099_060--Hb_000181_230 Hb_000418_150 Hb_000418_150 Hb_002099_060--Hb_000418_150 Hb_000438_020--Hb_000418_150 Hb_003177_090 Hb_003177_090 Hb_000438_020--Hb_003177_090 Hb_001307_200 Hb_001307_200 Hb_000438_020--Hb_001307_200 Hb_001689_030 Hb_001689_030 Hb_000438_020--Hb_001689_030 Hb_000757_020 Hb_000757_020 Hb_155150_010--Hb_000757_020 Hb_001446_060 Hb_001446_060 Hb_155150_010--Hb_001446_060 Hb_155150_010--Hb_001898_020 Hb_155150_010--Hb_000321_120 Hb_155150_010--Hb_000438_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.79538 14.0075 8.08958 13.0634 1.54012 3.47746
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.310494 0.232115 0.723649 8.44882 13.7719

CAGE analysis