Hb_001365_010

Information

Type -
Description -
Location Contig1365: 18744-24006
Sequence    

Annotation

kegg
ID rcu:RCOM_0866510
description neutral alpha-glucosidase ab precursor, putative (EC:3.2.1.20)
nr
ID KDP39742.1
description hypothetical protein JCGZ_02762 [Jatropha curcas]
swissprot
ID Q9F234
description Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1
trembl
ID A0A067KUF6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02762 PE=3 SV=1
Gene Ontology
ID GO:0009507
description neutral alpha-glucosidase ab

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10049: 18075-74100
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001365_010 0.0 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
2 Hb_001365_020 0.0875499912 - - hypothetical protein PRUPE_ppa000927mg [Prunus persica]
3 Hb_000329_080 0.0939947434 - - PREDICTED: transketolase, chloroplastic [Jatropha curcas]
4 Hb_000163_110 0.1059668492 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
5 Hb_000441_050 0.1119036597 - - PREDICTED: 187-kDa microtubule-associated protein AIR9 [Jatropha curcas]
6 Hb_003783_050 0.1170256297 - - conserved hypothetical protein [Ricinus communis]
7 Hb_035834_010 0.1197127095 - - zinc finger protein, putative [Ricinus communis]
8 Hb_005977_060 0.1201364454 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000300_680 0.1230687443 - - PREDICTED: uncharacterized protein LOC105632625 isoform X1 [Jatropha curcas]
10 Hb_002811_190 0.1255697787 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
11 Hb_000997_290 0.1330810109 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
12 Hb_000997_320 0.1379182015 - - PREDICTED: acylamino-acid-releasing enzyme-like [Malus domestica]
13 Hb_001195_370 0.1393764384 - - -
14 Hb_005276_070 0.1409481414 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
15 Hb_001405_080 0.1419912885 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
16 Hb_001811_080 0.1433769844 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
17 Hb_030312_030 0.1436692997 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
18 Hb_062013_010 0.1445940696 - - phosphoprotein phosphatase, putative [Ricinus communis]
19 Hb_000977_150 0.144833172 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
20 Hb_036388_010 0.1461865416 - - PREDICTED: formate--tetrahydrofolate ligase [Populus euphratica]

Gene co-expression network

sample Hb_001365_010 Hb_001365_010 Hb_001365_020 Hb_001365_020 Hb_001365_010--Hb_001365_020 Hb_000329_080 Hb_000329_080 Hb_001365_010--Hb_000329_080 Hb_000163_110 Hb_000163_110 Hb_001365_010--Hb_000163_110 Hb_000441_050 Hb_000441_050 Hb_001365_010--Hb_000441_050 Hb_003783_050 Hb_003783_050 Hb_001365_010--Hb_003783_050 Hb_035834_010 Hb_035834_010 Hb_001365_010--Hb_035834_010 Hb_001365_020--Hb_000441_050 Hb_003053_070 Hb_003053_070 Hb_001365_020--Hb_003053_070 Hb_005977_060 Hb_005977_060 Hb_001365_020--Hb_005977_060 Hb_001365_020--Hb_000163_110 Hb_005276_070 Hb_005276_070 Hb_001365_020--Hb_005276_070 Hb_000329_080--Hb_000163_110 Hb_001195_370 Hb_001195_370 Hb_000329_080--Hb_001195_370 Hb_000300_680 Hb_000300_680 Hb_000329_080--Hb_000300_680 Hb_001811_080 Hb_001811_080 Hb_000329_080--Hb_001811_080 Hb_000977_150 Hb_000977_150 Hb_000329_080--Hb_000977_150 Hb_000163_110--Hb_000441_050 Hb_000163_110--Hb_005977_060 Hb_000163_110--Hb_000300_680 Hb_000441_050--Hb_005977_060 Hb_004242_170 Hb_004242_170 Hb_000441_050--Hb_004242_170 Hb_001053_020 Hb_001053_020 Hb_000441_050--Hb_001053_020 Hb_002374_450 Hb_002374_450 Hb_000441_050--Hb_002374_450 Hb_000441_050--Hb_005276_070 Hb_000941_120 Hb_000941_120 Hb_003783_050--Hb_000941_120 Hb_036388_010 Hb_036388_010 Hb_003783_050--Hb_036388_010 Hb_030312_030 Hb_030312_030 Hb_003783_050--Hb_030312_030 Hb_001916_150 Hb_001916_150 Hb_003783_050--Hb_001916_150 Hb_003783_050--Hb_035834_010 Hb_000445_370 Hb_000445_370 Hb_003783_050--Hb_000445_370 Hb_035834_010--Hb_036388_010 Hb_035834_010--Hb_000445_370 Hb_035834_010--Hb_000441_050 Hb_035834_010--Hb_004242_170 Hb_000120_740 Hb_000120_740 Hb_035834_010--Hb_000120_740
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.329615 1.78785 5.29072 6.24087 0.805781 1.34581
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.48981 0.444588 1.54856 5.21839 13.6014

CAGE analysis