Hb_169586_010

Information

Type -
Description -
Location Contig169586: 2348-4100
Sequence    

Annotation

kegg
ID tcc:TCM_002124
description Acid phosphatase/vanadium-dependent haloperoxidase-related protein
nr
ID XP_007049120.1
description Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Theobroma cacao]
swissprot
ID O32107
description Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1
trembl
ID A0A061DLI3
description Acid phosphatase/vanadium-dependent haloperoxidase-related protein OS=Theobroma cacao GN=TCM_002124 PE=4 SV=1
Gene Ontology
ID GO:0044464
description acid phosphatase vanadium-dependent haloperoxidase-related protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169586_010 0.0 - - Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Theobroma cacao]
2 Hb_002026_070 0.1066309758 - - hypothetical protein PHAVU_002G2910001g, partial [Phaseolus vulgaris]
3 Hb_000330_150 0.1253509194 - - PREDICTED: dihydroflavonol-4-reductase-like [Jatropha curcas]
4 Hb_000940_170 0.1376590559 - - hypothetical protein VITISV_029834 [Vitis vinifera]
5 Hb_002928_200 0.1397904327 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
6 Hb_003058_200 0.1452188906 - - PREDICTED: dihydropyrimidinase [Populus euphratica]
7 Hb_000768_160 0.1469774908 - - PREDICTED: uncharacterized protein LOC105632531 [Jatropha curcas]
8 Hb_002631_130 0.148008215 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
9 Hb_000337_010 0.1527165926 - - PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
10 Hb_002477_040 0.153184265 - - P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2 [Theobroma cacao]
11 Hb_132101_010 0.1546817062 - - hypothetical protein B456_007G078100 [Gossypium raimondii]
12 Hb_002213_090 0.1551703277 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
13 Hb_006816_230 0.1561675503 - - protein disulfide isomerase, putative [Ricinus communis]
14 Hb_000244_260 0.1569806314 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
15 Hb_014497_060 0.1574094065 - - phosphofructokinase, putative [Ricinus communis]
16 Hb_020805_180 0.1585253894 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
17 Hb_000723_010 0.1592222192 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_069619_010 0.1632109978 - - Aspartic proteinase precursor, putative [Ricinus communis]
19 Hb_000649_060 0.1646150177 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
20 Hb_000019_170 0.1661615973 - - PREDICTED: alpha-mannosidase [Jatropha curcas]

Gene co-expression network

sample Hb_169586_010 Hb_169586_010 Hb_002026_070 Hb_002026_070 Hb_169586_010--Hb_002026_070 Hb_000330_150 Hb_000330_150 Hb_169586_010--Hb_000330_150 Hb_000940_170 Hb_000940_170 Hb_169586_010--Hb_000940_170 Hb_002928_200 Hb_002928_200 Hb_169586_010--Hb_002928_200 Hb_003058_200 Hb_003058_200 Hb_169586_010--Hb_003058_200 Hb_000768_160 Hb_000768_160 Hb_169586_010--Hb_000768_160 Hb_014497_060 Hb_014497_060 Hb_002026_070--Hb_014497_060 Hb_000019_170 Hb_000019_170 Hb_002026_070--Hb_000019_170 Hb_000922_260 Hb_000922_260 Hb_002026_070--Hb_000922_260 Hb_000244_260 Hb_000244_260 Hb_002026_070--Hb_000244_260 Hb_002232_490 Hb_002232_490 Hb_002026_070--Hb_002232_490 Hb_000330_150--Hb_002026_070 Hb_002631_130 Hb_002631_130 Hb_000330_150--Hb_002631_130 Hb_000330_150--Hb_014497_060 Hb_000473_030 Hb_000473_030 Hb_000330_150--Hb_000473_030 Hb_000337_010 Hb_000337_010 Hb_000330_150--Hb_000337_010 Hb_005892_020 Hb_005892_020 Hb_000940_170--Hb_005892_020 Hb_000940_170--Hb_003058_200 Hb_000800_110 Hb_000800_110 Hb_000940_170--Hb_000800_110 Hb_021297_020 Hb_021297_020 Hb_000940_170--Hb_021297_020 Hb_002851_010 Hb_002851_010 Hb_000940_170--Hb_002851_010 Hb_002928_200--Hb_000768_160 Hb_000406_150 Hb_000406_150 Hb_002928_200--Hb_000406_150 Hb_002928_200--Hb_002631_130 Hb_002477_040 Hb_002477_040 Hb_002928_200--Hb_002477_040 Hb_012678_020 Hb_012678_020 Hb_002928_200--Hb_012678_020 Hb_001006_270 Hb_001006_270 Hb_002928_200--Hb_001006_270 Hb_002072_010 Hb_002072_010 Hb_003058_200--Hb_002072_010 Hb_000674_010 Hb_000674_010 Hb_003058_200--Hb_000674_010 Hb_003058_200--Hb_000019_170 Hb_003058_200--Hb_021297_020 Hb_003058_200--Hb_002851_010 Hb_003125_180 Hb_003125_180 Hb_003058_200--Hb_003125_180 Hb_055062_040 Hb_055062_040 Hb_000768_160--Hb_055062_040 Hb_002093_060 Hb_002093_060 Hb_000768_160--Hb_002093_060 Hb_009615_060 Hb_009615_060 Hb_000768_160--Hb_009615_060 Hb_000768_160--Hb_002631_130 Hb_084670_010 Hb_084670_010 Hb_000768_160--Hb_084670_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.82761 2.81273 4.21843 11.512 3.90666 4.93643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04968 2.23804 2.75363 21.6932 11.2727

CAGE analysis