Hb_012678_020

Information

Type -
Description -
Location Contig12678: 40465-43727
Sequence    

Annotation

kegg
ID rcu:RCOM_0953360
description fk506 binding protein, putative
nr
ID XP_012066333.1
description PREDICTED: outer envelope protein 61 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LEL8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23897 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08087: 40474-43684
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012678_020 0.0 - - PREDICTED: outer envelope protein 61 isoform X1 [Jatropha curcas]
2 Hb_007558_100 0.0855865174 - - PREDICTED: uncharacterized protein LOC105649092 isoform X2 [Jatropha curcas]
3 Hb_002093_060 0.0859458608 - - phosphoprotein phosphatase, putative [Ricinus communis]
4 Hb_007383_020 0.0876389795 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004046_030 0.0920581083 - - PREDICTED: GPCR-type G protein 1 [Jatropha curcas]
6 Hb_000800_090 0.0973474828 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
7 Hb_003206_110 0.0994115479 - - Putative 1-aminocyclopropane-1-carboxylate deaminase [Gossypium arboreum]
8 Hb_001318_050 0.1007897334 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
9 Hb_005648_010 0.1020035273 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]
10 Hb_003988_050 0.1028750736 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]
11 Hb_002902_130 0.1030708063 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
12 Hb_012678_010 0.1034551169 - - PREDICTED: outer envelope protein 61-like [Gossypium raimondii]
13 Hb_002928_090 0.1046066828 - - PREDICTED: metallocarboxypeptidase A-like protein TRV_02598 [Jatropha curcas]
14 Hb_000976_100 0.1055042221 - - eukaryotic translation elongation factor, putative [Ricinus communis]
15 Hb_000928_190 0.1066635228 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
16 Hb_001957_010 0.1076727761 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Jatropha curcas]
17 Hb_055062_040 0.1078658683 - - ceramidase, putative [Ricinus communis]
18 Hb_004881_030 0.1087954715 - - PREDICTED: uncharacterized protein LOC105629532 isoform X1 [Jatropha curcas]
19 Hb_002804_040 0.1097476445 - - PREDICTED: fasciclin-like arabinogalactan protein 4 [Jatropha curcas]
20 Hb_003780_020 0.1103267034 - - PREDICTED: prolyl 4-hydroxylase subunit alpha-1 isoform X2 [Glycine max]

Gene co-expression network

sample Hb_012678_020 Hb_012678_020 Hb_007558_100 Hb_007558_100 Hb_012678_020--Hb_007558_100 Hb_002093_060 Hb_002093_060 Hb_012678_020--Hb_002093_060 Hb_007383_020 Hb_007383_020 Hb_012678_020--Hb_007383_020 Hb_004046_030 Hb_004046_030 Hb_012678_020--Hb_004046_030 Hb_000800_090 Hb_000800_090 Hb_012678_020--Hb_000800_090 Hb_003206_110 Hb_003206_110 Hb_012678_020--Hb_003206_110 Hb_000429_150 Hb_000429_150 Hb_007558_100--Hb_000429_150 Hb_002414_060 Hb_002414_060 Hb_007558_100--Hb_002414_060 Hb_002686_310 Hb_002686_310 Hb_007558_100--Hb_002686_310 Hb_055062_040 Hb_055062_040 Hb_007558_100--Hb_055062_040 Hb_084670_010 Hb_084670_010 Hb_007558_100--Hb_084670_010 Hb_005648_010 Hb_005648_010 Hb_002093_060--Hb_005648_010 Hb_002301_100 Hb_002301_100 Hb_002093_060--Hb_002301_100 Hb_000120_370 Hb_000120_370 Hb_002093_060--Hb_000120_370 Hb_001957_010 Hb_001957_010 Hb_002093_060--Hb_001957_010 Hb_000115_150 Hb_000115_150 Hb_002093_060--Hb_000115_150 Hb_001318_050 Hb_001318_050 Hb_007383_020--Hb_001318_050 Hb_007383_020--Hb_005648_010 Hb_000025_190 Hb_000025_190 Hb_007383_020--Hb_000025_190 Hb_007383_020--Hb_000800_090 Hb_007383_020--Hb_000115_150 Hb_004046_030--Hb_003206_110 Hb_006277_010 Hb_006277_010 Hb_004046_030--Hb_006277_010 Hb_170138_010 Hb_170138_010 Hb_004046_030--Hb_170138_010 Hb_000185_220 Hb_000185_220 Hb_004046_030--Hb_000185_220 Hb_004046_030--Hb_000800_090 Hb_005701_120 Hb_005701_120 Hb_000800_090--Hb_005701_120 Hb_000800_090--Hb_000025_190 Hb_001946_310 Hb_001946_310 Hb_000800_090--Hb_001946_310 Hb_000800_090--Hb_000185_220 Hb_000800_090--Hb_005648_010 Hb_003206_110--Hb_170138_010 Hb_003206_110--Hb_000185_220 Hb_001195_400 Hb_001195_400 Hb_003206_110--Hb_001195_400 Hb_000359_210 Hb_000359_210 Hb_003206_110--Hb_000359_210 Hb_003206_110--Hb_006277_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.4611 1.99722 3.09843 10.3639 2.5676 4.02214
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.69685 3.57179 3.47071 9.2077 7.33517

CAGE analysis