Hb_007558_100

Information

Type -
Description -
Location Contig7558: 74676-78061
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa006698mg
description hypothetical protein
nr
ID XP_012091036.1
description PREDICTED: uncharacterized protein LOC105649092 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JDC1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00643 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57037: 74793-78025
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007558_100 0.0 - - PREDICTED: uncharacterized protein LOC105649092 isoform X2 [Jatropha curcas]
2 Hb_000429_150 0.0842120848 - - hypothetical protein JCGZ_06799 [Jatropha curcas]
3 Hb_002414_060 0.0852298262 - - hypothetical protein EUGRSUZ_E01310 [Eucalyptus grandis]
4 Hb_012678_020 0.0855865174 - - PREDICTED: outer envelope protein 61 isoform X1 [Jatropha curcas]
5 Hb_002686_310 0.0873108824 - - PREDICTED: aquaporin SIP1-1 [Jatropha curcas]
6 Hb_055062_040 0.087510001 - - ceramidase, putative [Ricinus communis]
7 Hb_084670_010 0.0885863273 - - PREDICTED: thiamine biosynthetic bifunctional enzyme TH1, chloroplastic isoform X1 [Jatropha curcas]
8 Hb_000069_210 0.0886647762 - - PREDICTED: exportin-2 [Jatropha curcas]
9 Hb_179306_020 0.0899474555 - - PREDICTED: uncharacterized protein LOC105634392 isoform X1 [Jatropha curcas]
10 Hb_002968_080 0.0901818621 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Jatropha curcas]
11 Hb_000976_100 0.0924308299 - - eukaryotic translation elongation factor, putative [Ricinus communis]
12 Hb_009569_040 0.092930428 - - PREDICTED: uncharacterized protein LOC105635573 [Jatropha curcas]
13 Hb_138475_010 0.0938908293 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Populus euphratica]
14 Hb_001662_100 0.0963745615 - - PREDICTED: serine/threonine-protein kinase EDR1-like [Jatropha curcas]
15 Hb_004668_090 0.0967334826 - - PREDICTED: uncharacterized protein LOC105630440 [Jatropha curcas]
16 Hb_005725_130 0.0970627029 - - PREDICTED: uncharacterized protein KIAA0930 homolog isoform X2 [Jatropha curcas]
17 Hb_000140_280 0.0971265318 - - hypothetical protein B456_001G157900 [Gossypium raimondii]
18 Hb_143629_130 0.0978473676 - - unnamed protein product [Coffea canephora]
19 Hb_004317_060 0.0980895833 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
20 Hb_000237_040 0.1000934817 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]

Gene co-expression network

sample Hb_007558_100 Hb_007558_100 Hb_000429_150 Hb_000429_150 Hb_007558_100--Hb_000429_150 Hb_002414_060 Hb_002414_060 Hb_007558_100--Hb_002414_060 Hb_012678_020 Hb_012678_020 Hb_007558_100--Hb_012678_020 Hb_002686_310 Hb_002686_310 Hb_007558_100--Hb_002686_310 Hb_055062_040 Hb_055062_040 Hb_007558_100--Hb_055062_040 Hb_084670_010 Hb_084670_010 Hb_007558_100--Hb_084670_010 Hb_007638_030 Hb_007638_030 Hb_000429_150--Hb_007638_030 Hb_000140_280 Hb_000140_280 Hb_000429_150--Hb_000140_280 Hb_002414_050 Hb_002414_050 Hb_000429_150--Hb_002414_050 Hb_004567_090 Hb_004567_090 Hb_000429_150--Hb_004567_090 Hb_000429_150--Hb_002414_060 Hb_001571_050 Hb_001571_050 Hb_000429_150--Hb_001571_050 Hb_143629_130 Hb_143629_130 Hb_002414_060--Hb_143629_130 Hb_004317_060 Hb_004317_060 Hb_002414_060--Hb_004317_060 Hb_138475_010 Hb_138475_010 Hb_002414_060--Hb_138475_010 Hb_002414_060--Hb_000140_280 Hb_002093_060 Hb_002093_060 Hb_012678_020--Hb_002093_060 Hb_007383_020 Hb_007383_020 Hb_012678_020--Hb_007383_020 Hb_004046_030 Hb_004046_030 Hb_012678_020--Hb_004046_030 Hb_000800_090 Hb_000800_090 Hb_012678_020--Hb_000800_090 Hb_003206_110 Hb_003206_110 Hb_012678_020--Hb_003206_110 Hb_075315_010 Hb_075315_010 Hb_002686_310--Hb_075315_010 Hb_003055_040 Hb_003055_040 Hb_002686_310--Hb_003055_040 Hb_000915_240 Hb_000915_240 Hb_002686_310--Hb_000915_240 Hb_179306_020 Hb_179306_020 Hb_002686_310--Hb_179306_020 Hb_002686_310--Hb_143629_130 Hb_002025_330 Hb_002025_330 Hb_055062_040--Hb_002025_330 Hb_003280_020 Hb_003280_020 Hb_055062_040--Hb_003280_020 Hb_055062_040--Hb_084670_010 Hb_004048_120 Hb_004048_120 Hb_055062_040--Hb_004048_120 Hb_012733_070 Hb_012733_070 Hb_055062_040--Hb_012733_070 Hb_002749_060 Hb_002749_060 Hb_055062_040--Hb_002749_060 Hb_000358_050 Hb_000358_050 Hb_084670_010--Hb_000358_050 Hb_011537_060 Hb_011537_060 Hb_084670_010--Hb_011537_060 Hb_001159_010 Hb_001159_010 Hb_084670_010--Hb_001159_010 Hb_016347_010 Hb_016347_010 Hb_084670_010--Hb_016347_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.17613 2.43764 2.55331 6.84606 2.58045 5.1632
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.76689 3.38354 3.11565 7.50513 5.50193

CAGE analysis