Hb_014497_060

Information

Type -
Description -
Location Contig14497: 48188-55441
Sequence    

Annotation

kegg
ID rcu:RCOM_1602260
description phosphofructokinase, putative (EC:2.7.1.90)
nr
ID XP_002510738.1
description phosphofructokinase, putative [Ricinus communis]
swissprot
ID Q41140
description Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1
trembl
ID B9R8U5
description Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1
Gene Ontology
ID GO:0003872
description pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11698: 48277-55292
cDNA
(Sanger)
(ID:Location)		 024_A09.ab1: 48277-50124

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014497_060 0.0 - - phosphofructokinase, putative [Ricinus communis]
2 Hb_000256_110 0.0912409267 - - PREDICTED: aspartate aminotransferase, chloroplastic [Jatropha curcas]
3 Hb_002026_070 0.0954407542 - - hypothetical protein PHAVU_002G2910001g, partial [Phaseolus vulgaris]
4 Hb_002902_140 0.1061739128 - - PREDICTED: probable prolyl 4-hydroxylase 9 [Jatropha curcas]
5 Hb_002232_490 0.1076396276 - - PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Jatropha curcas]
6 Hb_002631_130 0.1108039085 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
7 Hb_000922_260 0.1148511786 - - PREDICTED: pantothenate kinase 2 [Jatropha curcas]
8 Hb_003490_050 0.1153981138 - - PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic [Jatropha curcas]
9 Hb_002392_020 0.1185856553 - - PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Jatropha curcas]
10 Hb_000007_060 0.1211848847 - - PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1-like isoform X1 [Jatropha curcas]
11 Hb_007943_150 0.1221537126 - - PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Jatropha curcas]
12 Hb_000244_260 0.1235507332 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
13 Hb_098533_010 0.125082803 - - hypothetical protein L484_003492 [Morus notabilis]
14 Hb_001584_340 0.127792998 - - PREDICTED: ATP-citrate synthase alpha chain protein 2 [Jatropha curcas]
15 Hb_085187_010 0.1316001237 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
16 Hb_022092_010 0.1322133056 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
17 Hb_007317_020 0.1344166313 - - PREDICTED: transmembrane 9 superfamily member 5 isoform X1 [Jatropha curcas]
18 Hb_024570_040 0.137611473 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
19 Hb_005588_100 0.1388947815 - - protein phosphatase, putative [Ricinus communis]
20 Hb_001473_170 0.1391217965 - - PREDICTED: non-lysosomal glucosylceramidase [Jatropha curcas]

Gene co-expression network

sample Hb_014497_060 Hb_014497_060 Hb_000256_110 Hb_000256_110 Hb_014497_060--Hb_000256_110 Hb_002026_070 Hb_002026_070 Hb_014497_060--Hb_002026_070 Hb_002902_140 Hb_002902_140 Hb_014497_060--Hb_002902_140 Hb_002232_490 Hb_002232_490 Hb_014497_060--Hb_002232_490 Hb_002631_130 Hb_002631_130 Hb_014497_060--Hb_002631_130 Hb_000922_260 Hb_000922_260 Hb_014497_060--Hb_000922_260 Hb_000739_210 Hb_000739_210 Hb_000256_110--Hb_000739_210 Hb_000256_110--Hb_000922_260 Hb_000668_110 Hb_000668_110 Hb_000256_110--Hb_000668_110 Hb_003490_050 Hb_003490_050 Hb_000256_110--Hb_003490_050 Hb_001405_080 Hb_001405_080 Hb_000256_110--Hb_001405_080 Hb_169586_010 Hb_169586_010 Hb_002026_070--Hb_169586_010 Hb_000019_170 Hb_000019_170 Hb_002026_070--Hb_000019_170 Hb_002026_070--Hb_000922_260 Hb_000244_260 Hb_000244_260 Hb_002026_070--Hb_000244_260 Hb_002026_070--Hb_002232_490 Hb_019654_020 Hb_019654_020 Hb_002902_140--Hb_019654_020 Hb_002249_080 Hb_002249_080 Hb_002902_140--Hb_002249_080 Hb_000007_060 Hb_000007_060 Hb_002902_140--Hb_000007_060 Hb_106890_010 Hb_106890_010 Hb_002902_140--Hb_106890_010 Hb_003355_010 Hb_003355_010 Hb_002902_140--Hb_003355_010 Hb_002232_490--Hb_003490_050 Hb_002392_020 Hb_002392_020 Hb_002232_490--Hb_002392_020 Hb_001226_130 Hb_001226_130 Hb_002232_490--Hb_001226_130 Hb_024570_040 Hb_024570_040 Hb_002232_490--Hb_024570_040 Hb_000109_260 Hb_000109_260 Hb_002232_490--Hb_000109_260 Hb_003490_060 Hb_003490_060 Hb_002232_490--Hb_003490_060 Hb_009615_060 Hb_009615_060 Hb_002631_130--Hb_009615_060 Hb_000197_190 Hb_000197_190 Hb_002631_130--Hb_000197_190 Hb_000494_030 Hb_000494_030 Hb_002631_130--Hb_000494_030 Hb_000768_160 Hb_000768_160 Hb_002631_130--Hb_000768_160 Hb_000683_050 Hb_000683_050 Hb_002631_130--Hb_000683_050 Hb_000548_070 Hb_000548_070 Hb_002631_130--Hb_000548_070 Hb_000922_260--Hb_003490_050 Hb_000922_260--Hb_000668_110 Hb_000922_260--Hb_002232_490 Hb_003549_050 Hb_003549_050 Hb_000922_260--Hb_003549_050 Hb_000922_260--Hb_001405_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.1042 13.0505 42.3585 64.7122 16.2267 17.4951
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.5222 7.32843 14.0253 78.5646 84.4714

CAGE analysis