Hb_009615_060

Information

Type -
Description -
Location Contig9615: 47254-56737
Sequence    

Annotation

kegg
ID rcu:RCOM_1454200
description oligopeptidase B, putative (EC:3.4.21.83)
nr
ID XP_012068562.1
description PREDICTED: prolyl endopeptidase-like [Jatropha curcas]
swissprot
ID Q59536
description Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1
trembl
ID A0A067KWC8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24466 PE=4 SV=1
Gene Ontology
ID GO:0005634
description prolyl endopeptidase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63728: 48187-56617 , PASA_asmbl_63729: 57488-63818
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009615_060 0.0 - - PREDICTED: prolyl endopeptidase-like [Jatropha curcas]
2 Hb_001493_150 0.0617381466 - - PREDICTED: alanine aminotransferase 2-like [Jatropha curcas]
3 Hb_000548_070 0.0654817236 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
4 Hb_001728_140 0.0675193433 - - -
5 Hb_003159_050 0.0784788821 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial isoform X1 [Jatropha curcas]
6 Hb_002631_130 0.0882648465 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
7 Hb_012393_030 0.0956673824 - - NADP-dependent isocitrate dehydrogenase family protein [Populus trichocarpa]
8 Hb_000197_190 0.0967966446 - - PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like [Jatropha curcas]
9 Hb_000800_090 0.0992532958 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
10 Hb_005648_010 0.099770336 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]
11 Hb_000768_160 0.1001227902 - - PREDICTED: uncharacterized protein LOC105632531 [Jatropha curcas]
12 Hb_000035_390 0.1008127173 - - hypothetical protein CISIN_1g003355mg [Citrus sinensis]
13 Hb_001269_600 0.1017704442 - - protein phosphatase 2c, putative [Ricinus communis]
14 Hb_002093_060 0.1025808917 - - phosphoprotein phosphatase, putative [Ricinus communis]
15 Hb_000185_220 0.1034708534 - - PREDICTED: uncharacterized protein LOC105631115 [Jatropha curcas]
16 Hb_002686_200 0.1042442124 - - glucosidase II beta subunit, putative [Ricinus communis]
17 Hb_003044_080 0.104850611 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
18 Hb_007933_040 0.105017611 - - PREDICTED: probable beta-D-xylosidase 6 isoform X2 [Jatropha curcas]
19 Hb_000535_050 0.1052284222 - - PREDICTED: cytosolic Fe-S cluster assembly factor narfl [Jatropha curcas]
20 Hb_001975_150 0.1065783657 - - PREDICTED: RINT1-like protein MAG2L [Jatropha curcas]

Gene co-expression network

sample Hb_009615_060 Hb_009615_060 Hb_001493_150 Hb_001493_150 Hb_009615_060--Hb_001493_150 Hb_000548_070 Hb_000548_070 Hb_009615_060--Hb_000548_070 Hb_001728_140 Hb_001728_140 Hb_009615_060--Hb_001728_140 Hb_003159_050 Hb_003159_050 Hb_009615_060--Hb_003159_050 Hb_002631_130 Hb_002631_130 Hb_009615_060--Hb_002631_130 Hb_012393_030 Hb_012393_030 Hb_009615_060--Hb_012393_030 Hb_002301_100 Hb_002301_100 Hb_001493_150--Hb_002301_100 Hb_001493_150--Hb_012393_030 Hb_001221_020 Hb_001221_020 Hb_001493_150--Hb_001221_020 Hb_005648_010 Hb_005648_010 Hb_001493_150--Hb_005648_010 Hb_021576_010 Hb_021576_010 Hb_001493_150--Hb_021576_010 Hb_000548_070--Hb_001728_140 Hb_003044_080 Hb_003044_080 Hb_000548_070--Hb_003044_080 Hb_001510_020 Hb_001510_020 Hb_000548_070--Hb_001510_020 Hb_000800_090 Hb_000800_090 Hb_000548_070--Hb_000800_090 Hb_000251_030 Hb_000251_030 Hb_000548_070--Hb_000251_030 Hb_001728_140--Hb_001493_150 Hb_001728_140--Hb_000251_030 Hb_001728_140--Hb_001510_020 Hb_002477_290 Hb_002477_290 Hb_001728_140--Hb_002477_290 Hb_001269_600 Hb_001269_600 Hb_003159_050--Hb_001269_600 Hb_007933_040 Hb_007933_040 Hb_003159_050--Hb_007933_040 Hb_012733_040 Hb_012733_040 Hb_003159_050--Hb_012733_040 Hb_007741_120 Hb_007741_120 Hb_003159_050--Hb_007741_120 Hb_003159_050--Hb_012393_030 Hb_000197_190 Hb_000197_190 Hb_002631_130--Hb_000197_190 Hb_000494_030 Hb_000494_030 Hb_002631_130--Hb_000494_030 Hb_000768_160 Hb_000768_160 Hb_002631_130--Hb_000768_160 Hb_000683_050 Hb_000683_050 Hb_002631_130--Hb_000683_050 Hb_002631_130--Hb_000548_070 Hb_006059_030 Hb_006059_030 Hb_012393_030--Hb_006059_030 Hb_000841_050 Hb_000841_050 Hb_012393_030--Hb_000841_050 Hb_001195_400 Hb_001195_400 Hb_012393_030--Hb_001195_400 Hb_005601_040 Hb_005601_040 Hb_012393_030--Hb_005601_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.12388 6.8978 12.1286 18.7541 6.17869 5.10403
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.41437 8.99288 11.8653 26.4412 20.8492

CAGE analysis