Hb_000337_010

Information

Type -
Description -
Location Contig337: 30-2106
Sequence    

Annotation

kegg
ID rcu:RCOM_0415020
description hypothetical protein
nr
ID XP_012074165.1
description PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
swissprot
ID F4JC97
description Proteasome activator subunit 4 OS=Arabidopsis thaliana GN=PA200 PE=2 SV=2
trembl
ID A0A067KJP0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09542 PE=4 SV=1
Gene Ontology
ID GO:0000502
description proteasome activating protein 200 isoform 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000337_010 0.0 - - PREDICTED: proteasome activator subunit 4 isoform X2 [Jatropha curcas]
2 Hb_000702_060 0.1156411721 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002026_070 0.1207570032 - - hypothetical protein PHAVU_002G2910001g, partial [Phaseolus vulgaris]
4 Hb_009535_030 0.1221637226 - - CP2 [Hevea brasiliensis]
5 Hb_053575_020 0.1234745087 - - PREDICTED: RNA-binding protein 39 [Jatropha curcas]
6 Hb_001235_130 0.1238874534 - - -
7 Hb_012325_010 0.1256844763 - - hypothetical protein RCOM_0068670 [Ricinus communis]
8 Hb_000625_030 0.129661122 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
9 Hb_000019_170 0.1307472967 - - PREDICTED: alpha-mannosidase [Jatropha curcas]
10 Hb_002539_010 0.1308545753 - - hypothetical protein JCGZ_15711 [Jatropha curcas]
11 Hb_098533_010 0.1323031876 - - hypothetical protein L484_003492 [Morus notabilis]
12 Hb_000590_070 0.1360044773 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
13 Hb_000684_360 0.1380390065 transcription factor TF Family: AP2 hypothetical protein JCGZ_16454 [Jatropha curcas]
14 Hb_000227_330 0.1391176316 - - Acyl-CoA synthetase [Ricinus communis]
15 Hb_007229_050 0.1397999957 - - PREDICTED: palmitoyl-protein thioesterase 1 isoform X1 [Jatropha curcas]
16 Hb_000157_070 0.140140735 - - PREDICTED: alpha-N-acetylglucosaminidase [Jatropha curcas]
17 Hb_029584_100 0.1420723426 - - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [Gossypium arboreum]
18 Hb_005181_060 0.142410804 - - ATP-citrate synthase, putative [Ricinus communis]
19 Hb_000683_050 0.1427785324 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
20 Hb_003125_180 0.1438936205 - - hypothetical protein JCGZ_26440 [Jatropha curcas]

Gene co-expression network

sample Hb_000337_010 Hb_000337_010 Hb_000702_060 Hb_000702_060 Hb_000337_010--Hb_000702_060 Hb_002026_070 Hb_002026_070 Hb_000337_010--Hb_002026_070 Hb_009535_030 Hb_009535_030 Hb_000337_010--Hb_009535_030 Hb_053575_020 Hb_053575_020 Hb_000337_010--Hb_053575_020 Hb_001235_130 Hb_001235_130 Hb_000337_010--Hb_001235_130 Hb_012325_010 Hb_012325_010 Hb_000337_010--Hb_012325_010 Hb_000684_360 Hb_000684_360 Hb_000702_060--Hb_000684_360 Hb_000702_060--Hb_053575_020 Hb_000347_110 Hb_000347_110 Hb_000702_060--Hb_000347_110 Hb_001780_150 Hb_001780_150 Hb_000702_060--Hb_001780_150 Hb_005181_180 Hb_005181_180 Hb_000702_060--Hb_005181_180 Hb_014497_060 Hb_014497_060 Hb_002026_070--Hb_014497_060 Hb_169586_010 Hb_169586_010 Hb_002026_070--Hb_169586_010 Hb_000019_170 Hb_000019_170 Hb_002026_070--Hb_000019_170 Hb_000922_260 Hb_000922_260 Hb_002026_070--Hb_000922_260 Hb_000244_260 Hb_000244_260 Hb_002026_070--Hb_000244_260 Hb_002232_490 Hb_002232_490 Hb_002026_070--Hb_002232_490 Hb_029584_100 Hb_029584_100 Hb_009535_030--Hb_029584_100 Hb_004030_060 Hb_004030_060 Hb_009535_030--Hb_004030_060 Hb_009535_030--Hb_001235_130 Hb_001247_270 Hb_001247_270 Hb_009535_030--Hb_001247_270 Hb_007229_050 Hb_007229_050 Hb_009535_030--Hb_007229_050 Hb_001473_170 Hb_001473_170 Hb_009535_030--Hb_001473_170 Hb_011032_010 Hb_011032_010 Hb_053575_020--Hb_011032_010 Hb_003125_180 Hb_003125_180 Hb_053575_020--Hb_003125_180 Hb_000227_330 Hb_000227_330 Hb_053575_020--Hb_000227_330 Hb_053575_020--Hb_000684_360 Hb_002151_100 Hb_002151_100 Hb_053575_020--Hb_002151_100 Hb_000866_110 Hb_000866_110 Hb_053575_020--Hb_000866_110 Hb_011174_080 Hb_011174_080 Hb_001235_130--Hb_011174_080 Hb_000256_160 Hb_000256_160 Hb_001235_130--Hb_000256_160 Hb_001235_130--Hb_007229_050 Hb_005854_040 Hb_005854_040 Hb_001235_130--Hb_005854_040 Hb_005588_120 Hb_005588_120 Hb_001235_130--Hb_005588_120 Hb_006916_110 Hb_006916_110 Hb_012325_010--Hb_006916_110 Hb_012325_010--Hb_000227_330 Hb_000342_050 Hb_000342_050 Hb_012325_010--Hb_000342_050 Hb_000125_180 Hb_000125_180 Hb_012325_010--Hb_000125_180 Hb_000157_070 Hb_000157_070 Hb_012325_010--Hb_000157_070 Hb_020805_180 Hb_020805_180 Hb_012325_010--Hb_020805_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.19447 0.723415 0.618841 1.29829 0.143303 0.282383
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.136664 0.295659 0.201363 2.20184 1.23285

CAGE analysis