Hb_002129_020

Information

Type -
Description -
Location Contig2129: 57642-63848
Sequence    

Annotation

kegg
ID tcc:TCM_000682
description Nucleotide-diphospho-sugar transferases superfamily protein
nr
ID XP_012079296.1
description PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
swissprot
ID Q9FH90
description Probable beta-1,4-xylosyltransferase IRX14H OS=Arabidopsis thaliana GN=IRX14H PE=2 SV=1
trembl
ID A0A067KI83
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12446 PE=4 SV=1
Gene Ontology
ID GO:0005768
description probable beta- -xylosyltransferase irx14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22026: 57864-63802
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002129_020 0.0 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
2 Hb_001195_090 0.0675511889 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
3 Hb_001216_110 0.0939809714 - - PREDICTED: protein GPR107-like [Jatropha curcas]
4 Hb_020586_010 0.1102911094 - - Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis]
5 Hb_009674_010 0.1118312533 - - AAEL007687-PA [Aedes aegypti]
6 Hb_028639_030 0.1126109546 - - PREDICTED: transmembrane 9 superfamily member 2-like [Jatropha curcas]
7 Hb_002157_270 0.1134371916 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
8 Hb_000684_310 0.1196313317 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
9 Hb_001969_140 0.1202054345 - - PREDICTED: uncharacterized protein LOC105634929 [Jatropha curcas]
10 Hb_003994_300 0.12602944 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001049_150 0.1285824829 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
12 Hb_000679_040 0.1304922932 - - Cellulose synthase 1 [Theobroma cacao]
13 Hb_001493_060 0.1320343521 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
14 Hb_002596_080 0.1323471624 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]
15 Hb_000011_220 0.1334734284 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
16 Hb_005348_110 0.1345438126 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
17 Hb_026740_020 0.1352589033 desease resistance Gene Name: NB-ARC NBS-LRR resistance protein RGH1 [Manihot esculenta]
18 Hb_000665_190 0.1355855862 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002164_020 0.1397511447 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003746_010 0.1400269639 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002129_020 Hb_002129_020 Hb_001195_090 Hb_001195_090 Hb_002129_020--Hb_001195_090 Hb_001216_110 Hb_001216_110 Hb_002129_020--Hb_001216_110 Hb_020586_010 Hb_020586_010 Hb_002129_020--Hb_020586_010 Hb_009674_010 Hb_009674_010 Hb_002129_020--Hb_009674_010 Hb_028639_030 Hb_028639_030 Hb_002129_020--Hb_028639_030 Hb_002157_270 Hb_002157_270 Hb_002129_020--Hb_002157_270 Hb_001195_090--Hb_028639_030 Hb_001195_090--Hb_001216_110 Hb_002596_080 Hb_002596_080 Hb_001195_090--Hb_002596_080 Hb_000684_310 Hb_000684_310 Hb_001195_090--Hb_000684_310 Hb_001493_060 Hb_001493_060 Hb_001195_090--Hb_001493_060 Hb_000679_040 Hb_000679_040 Hb_001216_110--Hb_000679_040 Hb_001216_110--Hb_028639_030 Hb_021576_070 Hb_021576_070 Hb_001216_110--Hb_021576_070 Hb_001969_140 Hb_001969_140 Hb_001216_110--Hb_001969_140 Hb_001195_310 Hb_001195_310 Hb_001216_110--Hb_001195_310 Hb_020586_010--Hb_001195_310 Hb_020586_010--Hb_001969_140 Hb_000003_310 Hb_000003_310 Hb_020586_010--Hb_000003_310 Hb_020586_010--Hb_001216_110 Hb_020586_010--Hb_000679_040 Hb_009674_010--Hb_001216_110 Hb_009674_010--Hb_000684_310 Hb_009674_010--Hb_000679_040 Hb_009674_010--Hb_001195_090 Hb_009674_010--Hb_028639_030 Hb_000570_020 Hb_000570_020 Hb_028639_030--Hb_000570_020 Hb_028639_030--Hb_021576_070 Hb_011360_110 Hb_011360_110 Hb_028639_030--Hb_011360_110 Hb_028639_030--Hb_000679_040 Hb_011310_040 Hb_011310_040 Hb_002157_270--Hb_011310_040 Hb_000950_030 Hb_000950_030 Hb_002157_270--Hb_000950_030 Hb_002157_270--Hb_002596_080 Hb_002157_270--Hb_001493_060 Hb_002164_020 Hb_002164_020 Hb_002157_270--Hb_002164_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.4529 7.88751 9.10508 53.2959 6.15876 7.37234
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.74759 3.22322 6.6249 8.26124 27.0175

CAGE analysis