Hb_001195_090

Information

Type -
Description -
Location Contig1195: 46535-48700
Sequence    

Annotation

kegg
ID rcu:RCOM_1594880
description Isoflavone reductase, putative (EC:1.3.1.45)
nr
ID XP_012071888.1
description PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
swissprot
ID E1U332
description Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1
trembl
ID A0A067L351
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04449 PE=4 SV=1
Gene Ontology
ID GO:0047526
description phenylcoumaran benzylic ether reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05772: 46513-48672 , PASA_asmbl_05773: 46560-47743
cDNA
(Sanger)
(ID:Location)		 006_B04.ab1: 47150-48672

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_090 0.0 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
2 Hb_002129_020 0.0675511889 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
3 Hb_028639_030 0.1073529468 - - PREDICTED: transmembrane 9 superfamily member 2-like [Jatropha curcas]
4 Hb_001216_110 0.1111860829 - - PREDICTED: protein GPR107-like [Jatropha curcas]
5 Hb_002596_080 0.1169959537 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]
6 Hb_000684_310 0.1179617506 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
7 Hb_001493_060 0.1182550105 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
8 Hb_009674_010 0.1190797324 - - AAEL007687-PA [Aedes aegypti]
9 Hb_020586_010 0.1191649112 - - Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis]
10 Hb_001969_140 0.1238772263 - - PREDICTED: uncharacterized protein LOC105634929 [Jatropha curcas]
11 Hb_002157_270 0.1275913158 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
12 Hb_000236_180 0.1276311687 - - serine hydroxymethyltransferase, putative [Ricinus communis]
13 Hb_000679_040 0.1280286554 - - Cellulose synthase 1 [Theobroma cacao]
14 Hb_001195_310 0.1322655473 - - ATP binding protein, putative [Ricinus communis]
15 Hb_000580_110 0.1382985596 - - PREDICTED: UDP-glucuronate 4-epimerase 3 [Jatropha curcas]
16 Hb_000236_190 0.1384154909 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
17 Hb_116702_010 0.1419832304 - - Leucine-rich repeat protein kinase family protein [Theobroma cacao]
18 Hb_030565_050 0.1424253421 - - UDP-D-GLUCURONATE 4-EPIMERASE 6 family protein [Populus trichocarpa]
19 Hb_000138_060 0.1462346596 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
20 Hb_009674_050 0.1466412578 - - Endosomal P24A protein precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001195_090 Hb_001195_090 Hb_002129_020 Hb_002129_020 Hb_001195_090--Hb_002129_020 Hb_028639_030 Hb_028639_030 Hb_001195_090--Hb_028639_030 Hb_001216_110 Hb_001216_110 Hb_001195_090--Hb_001216_110 Hb_002596_080 Hb_002596_080 Hb_001195_090--Hb_002596_080 Hb_000684_310 Hb_000684_310 Hb_001195_090--Hb_000684_310 Hb_001493_060 Hb_001493_060 Hb_001195_090--Hb_001493_060 Hb_002129_020--Hb_001216_110 Hb_020586_010 Hb_020586_010 Hb_002129_020--Hb_020586_010 Hb_009674_010 Hb_009674_010 Hb_002129_020--Hb_009674_010 Hb_002129_020--Hb_028639_030 Hb_002157_270 Hb_002157_270 Hb_002129_020--Hb_002157_270 Hb_028639_030--Hb_001216_110 Hb_000570_020 Hb_000570_020 Hb_028639_030--Hb_000570_020 Hb_021576_070 Hb_021576_070 Hb_028639_030--Hb_021576_070 Hb_011360_110 Hb_011360_110 Hb_028639_030--Hb_011360_110 Hb_000679_040 Hb_000679_040 Hb_028639_030--Hb_000679_040 Hb_001216_110--Hb_000679_040 Hb_001216_110--Hb_021576_070 Hb_001969_140 Hb_001969_140 Hb_001216_110--Hb_001969_140 Hb_001195_310 Hb_001195_310 Hb_001216_110--Hb_001195_310 Hb_011310_040 Hb_011310_040 Hb_002596_080--Hb_011310_040 Hb_002596_080--Hb_001493_060 Hb_002596_080--Hb_002157_270 Hb_003226_250 Hb_003226_250 Hb_002596_080--Hb_003226_250 Hb_000445_150 Hb_000445_150 Hb_002596_080--Hb_000445_150 Hb_000003_310 Hb_000003_310 Hb_000684_310--Hb_000003_310 Hb_000684_310--Hb_001216_110 Hb_000684_310--Hb_009674_010 Hb_000684_310--Hb_000679_040 Hb_000254_070 Hb_000254_070 Hb_000684_310--Hb_000254_070 Hb_001105_130 Hb_001105_130 Hb_000684_310--Hb_001105_130 Hb_002164_020 Hb_002164_020 Hb_001493_060--Hb_002164_020 Hb_000347_190 Hb_000347_190 Hb_001493_060--Hb_000347_190 Hb_009079_050 Hb_009079_050 Hb_001493_060--Hb_009079_050 Hb_000580_110 Hb_000580_110 Hb_001493_060--Hb_000580_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.1984 20.3402 17.9508 112.99 9.2543 11.1119
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.98244 5.66493 10.3886 21.7382 66.8931

CAGE analysis