Hb_000950_030

Information

Type -
Description -
Location Contig950: 46540-56921
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa008167mg
description hypothetical protein
nr
ID XP_010269676.1
description PREDICTED: probable sugar phosphate/phosphate translocator At3g10290 [Nelumbo nucifera]
swissprot
ID Q9FYE5
description Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1
trembl
ID W9QKA8
description Uncharacterized protein OS=Morus notabilis GN=L484_016542 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable sugar phosphate phosphate translocator at5g04160

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000950_030 0.0 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g10290 [Nelumbo nucifera]
2 Hb_002157_270 0.1143793085 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
3 Hb_012707_010 0.116475251 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
4 Hb_004055_020 0.1275555277 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
5 Hb_000806_130 0.1378379033 - - Adenosine kinase 2 [Theobroma cacao]
6 Hb_001486_350 0.156509883 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
7 Hb_006634_110 0.1579592977 - - BnaC04g40780D [Brassica napus]
8 Hb_008695_220 0.1583575897 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
9 Hb_000236_190 0.159863938 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
10 Hb_000300_420 0.165676738 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
11 Hb_048702_010 0.1660895901 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X1 [Jatropha curcas]
12 Hb_001989_100 0.1683161068 - - PREDICTED: uncharacterized protein LOC105636214 [Jatropha curcas]
13 Hb_001329_180 0.1691619879 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
14 Hb_000300_410 0.1702336576 - - hypothetical protein POPTR_0013s05860g [Populus trichocarpa]
15 Hb_000077_100 0.174408281 - - PREDICTED: mannan endo-1,4-beta-mannosidase 2-like isoform X1 [Jatropha curcas]
16 Hb_000580_110 0.1798671291 - - PREDICTED: UDP-glucuronate 4-epimerase 3 [Jatropha curcas]
17 Hb_000236_180 0.180016913 - - serine hydroxymethyltransferase, putative [Ricinus communis]
18 Hb_000455_070 0.1804923565 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]
19 Hb_009674_010 0.1811689722 - - AAEL007687-PA [Aedes aegypti]
20 Hb_002596_080 0.181407062 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]

Gene co-expression network

sample Hb_000950_030 Hb_000950_030 Hb_002157_270 Hb_002157_270 Hb_000950_030--Hb_002157_270 Hb_012707_010 Hb_012707_010 Hb_000950_030--Hb_012707_010 Hb_004055_020 Hb_004055_020 Hb_000950_030--Hb_004055_020 Hb_000806_130 Hb_000806_130 Hb_000950_030--Hb_000806_130 Hb_001486_350 Hb_001486_350 Hb_000950_030--Hb_001486_350 Hb_006634_110 Hb_006634_110 Hb_000950_030--Hb_006634_110 Hb_011310_040 Hb_011310_040 Hb_002157_270--Hb_011310_040 Hb_002129_020 Hb_002129_020 Hb_002157_270--Hb_002129_020 Hb_002596_080 Hb_002596_080 Hb_002157_270--Hb_002596_080 Hb_001493_060 Hb_001493_060 Hb_002157_270--Hb_001493_060 Hb_002164_020 Hb_002164_020 Hb_002157_270--Hb_002164_020 Hb_000696_070 Hb_000696_070 Hb_012707_010--Hb_000696_070 Hb_012707_010--Hb_001486_350 Hb_012707_010--Hb_000806_130 Hb_012707_010--Hb_002157_270 Hb_001989_100 Hb_001989_100 Hb_012707_010--Hb_001989_100 Hb_004055_020--Hb_002157_270 Hb_000107_350 Hb_000107_350 Hb_004055_020--Hb_000107_350 Hb_004055_020--Hb_000806_130 Hb_026527_010 Hb_026527_010 Hb_004055_020--Hb_026527_010 Hb_000077_100 Hb_000077_100 Hb_004055_020--Hb_000077_100 Hb_000806_130--Hb_001486_350 Hb_001329_180 Hb_001329_180 Hb_000806_130--Hb_001329_180 Hb_000806_130--Hb_000696_070 Hb_000236_190 Hb_000236_190 Hb_000806_130--Hb_000236_190 Hb_001119_070 Hb_001119_070 Hb_000806_130--Hb_001119_070 Hb_000300_420 Hb_000300_420 Hb_000806_130--Hb_000300_420 Hb_001486_350--Hb_000696_070 Hb_001486_350--Hb_000236_190 Hb_002781_050 Hb_002781_050 Hb_001486_350--Hb_002781_050 Hb_001486_350--Hb_000300_420 Hb_122636_010 Hb_122636_010 Hb_006634_110--Hb_122636_010 Hb_048702_010 Hb_048702_010 Hb_006634_110--Hb_048702_010 Hb_100137_010 Hb_100137_010 Hb_006634_110--Hb_100137_010 Hb_010577_010 Hb_010577_010 Hb_006634_110--Hb_010577_010 Hb_053709_040 Hb_053709_040 Hb_006634_110--Hb_053709_040 Hb_000671_130 Hb_000671_130 Hb_006634_110--Hb_000671_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.687071 0.316524 1.66692 17.9726 0.612053 1.54753
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.38728 1.63646 0.996626 3.09788 7.10298

CAGE analysis