Hb_100137_010

Information

Type -
Description -
Location Contig100137: 2195-5491
Sequence    

Annotation

kegg
ID pvu:PHAVU_001G255300g
description hypothetical protein
nr
ID KDP26690.1
description hypothetical protein JCGZ_17848 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K368
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17848 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00239: 4449-4963
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100137_010 0.0 - - hypothetical protein JCGZ_17848 [Jatropha curcas]
2 Hb_004466_060 0.123102445 - - hypothetical protein POPTR_0009s12110g [Populus trichocarpa]
3 Hb_048702_010 0.1275119634 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X1 [Jatropha curcas]
4 Hb_002611_030 0.1277214038 - - PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
5 Hb_000077_290 0.1314251781 - - conserved hypothetical protein [Ricinus communis]
6 Hb_122636_010 0.1334421396 - - dienelactone hydrolase family protein [Populus trichocarpa]
7 Hb_001217_010 0.136683792 - - hypothetical protein JCGZ_04022 [Jatropha curcas]
8 Hb_017014_010 0.1384335578 - - PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]
9 Hb_002760_050 0.1394953825 - - conserved hypothetical protein [Ricinus communis]
10 Hb_009083_030 0.1395853409 - - hypothetical protein POPTR_0007s14760g [Populus trichocarpa]
11 Hb_006634_110 0.1397678988 - - BnaC04g40780D [Brassica napus]
12 Hb_000008_190 0.1430227428 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
13 Hb_188313_010 0.1460353955 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]
14 Hb_002660_110 0.1480697991 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
15 Hb_011942_060 0.1481044525 - - hypothetical protein CISIN_1g028965mg [Citrus sinensis]
16 Hb_184541_010 0.1530471037 - - PREDICTED: selT-like protein [Jatropha curcas]
17 Hb_010984_040 0.1565909018 - - hypothetical protein M569_17286, partial [Genlisea aurea]
18 Hb_000053_030 0.1581131765 - - hypothetical protein CISIN_1g0010393mg, partial [Citrus sinensis]
19 Hb_000291_160 0.1599047128 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
20 Hb_165402_010 0.1610194707 - - PREDICTED: cullin-1 isoform X3 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_100137_010 Hb_100137_010 Hb_004466_060 Hb_004466_060 Hb_100137_010--Hb_004466_060 Hb_048702_010 Hb_048702_010 Hb_100137_010--Hb_048702_010 Hb_002611_030 Hb_002611_030 Hb_100137_010--Hb_002611_030 Hb_000077_290 Hb_000077_290 Hb_100137_010--Hb_000077_290 Hb_122636_010 Hb_122636_010 Hb_100137_010--Hb_122636_010 Hb_001217_010 Hb_001217_010 Hb_100137_010--Hb_001217_010 Hb_000053_030 Hb_000053_030 Hb_004466_060--Hb_000053_030 Hb_000168_010 Hb_000168_010 Hb_004466_060--Hb_000168_010 Hb_089202_010 Hb_089202_010 Hb_004466_060--Hb_089202_010 Hb_004466_060--Hb_002611_030 Hb_002562_110 Hb_002562_110 Hb_004466_060--Hb_002562_110 Hb_006634_110 Hb_006634_110 Hb_048702_010--Hb_006634_110 Hb_048702_010--Hb_002611_030 Hb_017014_010 Hb_017014_010 Hb_048702_010--Hb_017014_010 Hb_048702_010--Hb_122636_010 Hb_010577_010 Hb_010577_010 Hb_048702_010--Hb_010577_010 Hb_002611_030--Hb_017014_010 Hb_009083_030 Hb_009083_030 Hb_002611_030--Hb_009083_030 Hb_010003_010 Hb_010003_010 Hb_002611_030--Hb_010003_010 Hb_005170_010 Hb_005170_010 Hb_000077_290--Hb_005170_010 Hb_000230_180 Hb_000230_180 Hb_000077_290--Hb_000230_180 Hb_004525_040 Hb_004525_040 Hb_000077_290--Hb_004525_040 Hb_012194_060 Hb_012194_060 Hb_000077_290--Hb_012194_060 Hb_000035_330 Hb_000035_330 Hb_000077_290--Hb_000035_330 Hb_000889_100 Hb_000889_100 Hb_000077_290--Hb_000889_100 Hb_122636_010--Hb_006634_110 Hb_000671_130 Hb_000671_130 Hb_122636_010--Hb_000671_130 Hb_002660_110 Hb_002660_110 Hb_122636_010--Hb_002660_110 Hb_003207_150 Hb_003207_150 Hb_122636_010--Hb_003207_150 Hb_122636_010--Hb_001217_010 Hb_188313_010 Hb_188313_010 Hb_001217_010--Hb_188313_010 Hb_002760_050 Hb_002760_050 Hb_001217_010--Hb_002760_050 Hb_000125_020 Hb_000125_020 Hb_001217_010--Hb_000125_020 Hb_000291_160 Hb_000291_160 Hb_001217_010--Hb_000291_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.953 11.7508 11.3648 106.844 10.7931 34.6233
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.443 10.6263 9.39627 18.021 19.038

CAGE analysis