Hb_000291_160

Information

Type -
Description -
Location Contig291: 131502-132566
Sequence    

Annotation

kegg
ID rcu:RCOM_1033190
description hypothetical protein
nr
ID XP_012078134.1
description PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9RJC8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033190 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30515: 131769-132307
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000291_160 0.0 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
2 Hb_002660_110 0.133015186 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
3 Hb_000739_200 0.1393907228 transcription factor TF Family: LOB hypothetical protein CICLE_v10021992mg [Citrus clementina]
4 Hb_026740_020 0.144408207 desease resistance Gene Name: NB-ARC NBS-LRR resistance protein RGH1 [Manihot esculenta]
5 Hb_001999_100 0.1472421689 - - PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
6 Hb_001217_010 0.1484508649 - - hypothetical protein JCGZ_04022 [Jatropha curcas]
7 Hb_183610_010 0.1514817188 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
8 Hb_002760_050 0.1541033316 - - conserved hypothetical protein [Ricinus communis]
9 Hb_100137_010 0.1599047128 - - hypothetical protein JCGZ_17848 [Jatropha curcas]
10 Hb_001217_040 0.1610399762 - - hypothetical protein MIMGU_mgv1a0002421mg, partial [Erythranthe guttata]
11 Hb_004117_120 0.165237976 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
12 Hb_122636_010 0.1657172785 - - dienelactone hydrolase family protein [Populus trichocarpa]
13 Hb_003911_020 0.167928122 - - PREDICTED: uncharacterized protein LOC105121332 [Populus euphratica]
14 Hb_000984_310 0.1725599463 - - Hydrolase, hydrolyzing O-glycosyl compounds, putative [Theobroma cacao]
15 Hb_000008_190 0.1726045284 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
16 Hb_148130_020 0.1767143 - - -
17 Hb_003052_180 0.1773989344 - - Diacylglycerol Cholinephosphotransferase [Ricinus communis]
18 Hb_003071_070 0.1780848833 - - sucrose synthase 3 [Hevea brasiliensis]
19 Hb_002639_020 0.1796178112 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
20 Hb_000311_040 0.1816084189 - - PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]

Gene co-expression network

sample Hb_000291_160 Hb_000291_160 Hb_002660_110 Hb_002660_110 Hb_000291_160--Hb_002660_110 Hb_000739_200 Hb_000739_200 Hb_000291_160--Hb_000739_200 Hb_026740_020 Hb_026740_020 Hb_000291_160--Hb_026740_020 Hb_001999_100 Hb_001999_100 Hb_000291_160--Hb_001999_100 Hb_001217_010 Hb_001217_010 Hb_000291_160--Hb_001217_010 Hb_183610_010 Hb_183610_010 Hb_000291_160--Hb_183610_010 Hb_003052_180 Hb_003052_180 Hb_002660_110--Hb_003052_180 Hb_000622_350 Hb_000622_350 Hb_002660_110--Hb_000622_350 Hb_122636_010 Hb_122636_010 Hb_002660_110--Hb_122636_010 Hb_000008_190 Hb_000008_190 Hb_002660_110--Hb_000008_190 Hb_003071_070 Hb_003071_070 Hb_002660_110--Hb_003071_070 Hb_001609_040 Hb_001609_040 Hb_002660_110--Hb_001609_040 Hb_002192_030 Hb_002192_030 Hb_000739_200--Hb_002192_030 Hb_028207_060 Hb_028207_060 Hb_000739_200--Hb_028207_060 Hb_000739_200--Hb_026740_020 Hb_000739_200--Hb_183610_010 Hb_000739_200--Hb_002660_110 Hb_000193_300 Hb_000193_300 Hb_026740_020--Hb_000193_300 Hb_000413_020 Hb_000413_020 Hb_026740_020--Hb_000413_020 Hb_000138_060 Hb_000138_060 Hb_026740_020--Hb_000138_060 Hb_002289_150 Hb_002289_150 Hb_026740_020--Hb_002289_150 Hb_005192_010 Hb_005192_010 Hb_026740_020--Hb_005192_010 Hb_000265_140 Hb_000265_140 Hb_026740_020--Hb_000265_140 Hb_001481_150 Hb_001481_150 Hb_001999_100--Hb_001481_150 Hb_006569_060 Hb_006569_060 Hb_001999_100--Hb_006569_060 Hb_001999_100--Hb_002660_110 Hb_033152_070 Hb_033152_070 Hb_001999_100--Hb_033152_070 Hb_001999_100--Hb_000008_190 Hb_001999_100--Hb_026740_020 Hb_001217_010--Hb_122636_010 Hb_100137_010 Hb_100137_010 Hb_001217_010--Hb_100137_010 Hb_188313_010 Hb_188313_010 Hb_001217_010--Hb_188313_010 Hb_002760_050 Hb_002760_050 Hb_001217_010--Hb_002760_050 Hb_000125_020 Hb_000125_020 Hb_001217_010--Hb_000125_020 Hb_004117_120 Hb_004117_120 Hb_183610_010--Hb_004117_120 Hb_005183_170 Hb_005183_170 Hb_183610_010--Hb_005183_170 Hb_000984_310 Hb_000984_310 Hb_183610_010--Hb_000984_310 Hb_001217_040 Hb_001217_040 Hb_183610_010--Hb_001217_040 Hb_000482_020 Hb_000482_020 Hb_183610_010--Hb_000482_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.670649 0.738572 0.216944 3.51822 0.153377 0.746893
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.420058 0.412956 0.531056 0.432083 0.674441

CAGE analysis