Hb_006569_060

Information

Type -
Description -
Location Contig6569: 79595-81848
Sequence    

Annotation

kegg
ID pvu:PHAVU_007G094600g
description hypothetical protein
nr
ID AHK05706.1
description plasma membrane intrinsic protein PIP2;3 [Hevea brasiliensis]
swissprot
ID Q9XF58
description Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1
trembl
ID A0A0C4K4W2
description Hevea brasiliensis plasma membrane intrinsic protein PIP2;3 mRNA OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0016021
description probable aquaporin pip2-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52772: 79793-81957
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006569_060 0.0 - - plasma membrane intrinsic protein PIP2;3 [Hevea brasiliensis]
2 Hb_001999_100 0.1162200035 - - PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
3 Hb_019280_020 0.1374165976 - - PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
4 Hb_012362_030 0.1378008557 - - PREDICTED: GPI-anchored protein LORELEI-like [Populus euphratica]
5 Hb_001481_150 0.1384640075 - - hypothetical protein POPTR_0001s15440g [Populus trichocarpa]
6 Hb_002217_500 0.1436196513 - - hypothetical protein JCGZ_19014 [Jatropha curcas]
7 Hb_004453_070 0.1457196811 transcription factor TF Family: CPP PREDICTED: CRC domain-containing protein TSO1-like isoform X1 [Jatropha curcas]
8 Hb_004480_020 0.1512020426 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
9 Hb_000008_190 0.1540861373 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
10 Hb_118507_010 0.1555087353 - - hypothetical protein VITISV_019292 [Vitis vinifera]
11 Hb_001347_050 0.1556852621 - - serine/threonine protein kinase, putative [Ricinus communis]
12 Hb_001195_410 0.1571919102 - - PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
13 Hb_147245_010 0.1649809013 - - casein kinase, putative [Ricinus communis]
14 Hb_000679_100 0.1659394304 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
15 Hb_000984_310 0.1676305879 - - Hydrolase, hydrolyzing O-glycosyl compounds, putative [Theobroma cacao]
16 Hb_001486_190 0.1682891243 - - hypothetical protein JCGZ_02702 [Jatropha curcas]
17 Hb_006469_070 0.1683316354 - - PREDICTED: F-box/kelch-repeat protein At1g22040 [Jatropha curcas]
18 Hb_005539_310 0.1774796889 - - basic helix-loop-helix-containing protein, putative [Ricinus communis]
19 Hb_001493_090 0.1777478061 - - conserved hypothetical protein [Ricinus communis]
20 Hb_012760_050 0.178379102 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]

Gene co-expression network

sample Hb_006569_060 Hb_006569_060 Hb_001999_100 Hb_001999_100 Hb_006569_060--Hb_001999_100 Hb_019280_020 Hb_019280_020 Hb_006569_060--Hb_019280_020 Hb_012362_030 Hb_012362_030 Hb_006569_060--Hb_012362_030 Hb_001481_150 Hb_001481_150 Hb_006569_060--Hb_001481_150 Hb_002217_500 Hb_002217_500 Hb_006569_060--Hb_002217_500 Hb_004453_070 Hb_004453_070 Hb_006569_060--Hb_004453_070 Hb_001999_100--Hb_001481_150 Hb_002660_110 Hb_002660_110 Hb_001999_100--Hb_002660_110 Hb_033152_070 Hb_033152_070 Hb_001999_100--Hb_033152_070 Hb_000008_190 Hb_000008_190 Hb_001999_100--Hb_000008_190 Hb_026740_020 Hb_026740_020 Hb_001999_100--Hb_026740_020 Hb_019280_020--Hb_012362_030 Hb_019280_020--Hb_001481_150 Hb_000152_710 Hb_000152_710 Hb_019280_020--Hb_000152_710 Hb_029510_100 Hb_029510_100 Hb_019280_020--Hb_029510_100 Hb_019280_020--Hb_033152_070 Hb_004525_040 Hb_004525_040 Hb_019280_020--Hb_004525_040 Hb_000062_530 Hb_000062_530 Hb_012362_030--Hb_000062_530 Hb_000062_090 Hb_000062_090 Hb_012362_030--Hb_000062_090 Hb_012362_030--Hb_029510_100 Hb_147245_010 Hb_147245_010 Hb_012362_030--Hb_147245_010 Hb_012362_030--Hb_000008_190 Hb_004480_020 Hb_004480_020 Hb_001481_150--Hb_004480_020 Hb_000928_190 Hb_000928_190 Hb_001481_150--Hb_000928_190 Hb_001481_150--Hb_033152_070 Hb_001481_150--Hb_004525_040 Hb_001006_270 Hb_001006_270 Hb_001481_150--Hb_001006_270 Hb_001474_020 Hb_001474_020 Hb_002217_500--Hb_001474_020 Hb_003975_010 Hb_003975_010 Hb_002217_500--Hb_003975_010 Hb_002046_060 Hb_002046_060 Hb_002217_500--Hb_002046_060 Hb_001691_040 Hb_001691_040 Hb_002217_500--Hb_001691_040 Hb_002450_030 Hb_002450_030 Hb_002217_500--Hb_002450_030 Hb_023344_110 Hb_023344_110 Hb_002217_500--Hb_023344_110 Hb_001195_410 Hb_001195_410 Hb_004453_070--Hb_001195_410 Hb_000796_020 Hb_000796_020 Hb_004453_070--Hb_000796_020 Hb_000776_060 Hb_000776_060 Hb_004453_070--Hb_000776_060 Hb_004453_070--Hb_012362_030 Hb_004453_070--Hb_000062_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
91.8458 226.167 146.526 780.491 71.4558 59.3566
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
213.382 61.9616 130.759 170.713 119.358

CAGE analysis