Hb_000062_090

Information

Type -
Description -
Location Contig62: 70191-73868
Sequence    

Annotation

kegg
ID rcu:RCOM_1082500
description hypothetical protein
nr
ID XP_012085591.1
description PREDICTED: uncharacterized protein LOC105644743 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17891 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51408: 70185-73725
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000062_090 0.0 - - PREDICTED: uncharacterized protein LOC105644743 isoform X2 [Jatropha curcas]
2 Hb_000402_130 0.1057386336 - - PREDICTED: AP-1 complex subunit mu-2 [Jatropha curcas]
3 Hb_048476_060 0.1129908107 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
4 Hb_006711_090 0.1170731423 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
5 Hb_004158_020 0.1192241221 - - Rab1 [Hevea brasiliensis]
6 Hb_000671_130 0.1223080386 - - PREDICTED: CMP-sialic acid transporter 2 isoform X2 [Jatropha curcas]
7 Hb_012362_030 0.1227843959 - - PREDICTED: GPI-anchored protein LORELEI-like [Populus euphratica]
8 Hb_000023_310 0.127557187 - - PREDICTED: probable folate-biopterin transporter 2 [Populus euphratica]
9 Hb_001609_040 0.1315355436 - - hypothetical protein POPTR_0017s05650g [Populus trichocarpa]
10 Hb_000953_130 0.1319057615 - - PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme [Jatropha curcas]
11 Hb_033152_070 0.1340497917 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
12 Hb_012760_050 0.13438305 - - RING-H2 finger protein ATL4M, putative [Ricinus communis]
13 Hb_000776_060 0.1357744299 - - histone H4 [Zea mays]
14 Hb_019280_020 0.1371512419 - - PREDICTED: proline-rich receptor-like protein kinase PERK14 isoform X1 [Jatropha curcas]
15 Hb_005701_120 0.1373279591 - - PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Cucumis sativus]
16 Hb_000683_100 0.1375197591 - - hypothetical protein JCGZ_22137 [Jatropha curcas]
17 Hb_005993_010 0.1393378779 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
18 Hb_000008_190 0.1400935376 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
19 Hb_019181_030 0.1412861157 - - PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6-like [Pyrus x bretschneideri]
20 Hb_012305_130 0.1416466306 - - PREDICTED: GTP-binding protein SAR1A [Jatropha curcas]

Gene co-expression network

sample Hb_000062_090 Hb_000062_090 Hb_000402_130 Hb_000402_130 Hb_000062_090--Hb_000402_130 Hb_048476_060 Hb_048476_060 Hb_000062_090--Hb_048476_060 Hb_006711_090 Hb_006711_090 Hb_000062_090--Hb_006711_090 Hb_004158_020 Hb_004158_020 Hb_000062_090--Hb_004158_020 Hb_000671_130 Hb_000671_130 Hb_000062_090--Hb_000671_130 Hb_012362_030 Hb_012362_030 Hb_000062_090--Hb_012362_030 Hb_005701_120 Hb_005701_120 Hb_000402_130--Hb_005701_120 Hb_033152_070 Hb_033152_070 Hb_000402_130--Hb_033152_070 Hb_002110_100 Hb_002110_100 Hb_000402_130--Hb_002110_100 Hb_003207_020 Hb_003207_020 Hb_000402_130--Hb_003207_020 Hb_000060_050 Hb_000060_050 Hb_000402_130--Hb_000060_050 Hb_000025_190 Hb_000025_190 Hb_000402_130--Hb_000025_190 Hb_002193_060 Hb_002193_060 Hb_048476_060--Hb_002193_060 Hb_185830_060 Hb_185830_060 Hb_048476_060--Hb_185830_060 Hb_048476_060--Hb_003207_020 Hb_000110_050 Hb_000110_050 Hb_048476_060--Hb_000110_050 Hb_048476_060--Hb_000402_130 Hb_002007_320 Hb_002007_320 Hb_048476_060--Hb_002007_320 Hb_006711_090--Hb_002007_320 Hb_000935_040 Hb_000935_040 Hb_006711_090--Hb_000935_040 Hb_001904_050 Hb_001904_050 Hb_006711_090--Hb_001904_050 Hb_006711_090--Hb_004158_020 Hb_188281_030 Hb_188281_030 Hb_006711_090--Hb_188281_030 Hb_004158_020--Hb_002110_100 Hb_004158_020--Hb_000402_130 Hb_032920_070 Hb_032920_070 Hb_004158_020--Hb_032920_070 Hb_001754_080 Hb_001754_080 Hb_004158_020--Hb_001754_080 Hb_004007_110 Hb_004007_110 Hb_004158_020--Hb_004007_110 Hb_000023_310 Hb_000023_310 Hb_004158_020--Hb_000023_310 Hb_122636_010 Hb_122636_010 Hb_000671_130--Hb_122636_010 Hb_091349_010 Hb_091349_010 Hb_000671_130--Hb_091349_010 Hb_000671_130--Hb_003207_020 Hb_000671_130--Hb_033152_070 Hb_000107_110 Hb_000107_110 Hb_000671_130--Hb_000107_110 Hb_000671_130--Hb_048476_060 Hb_019280_020 Hb_019280_020 Hb_012362_030--Hb_019280_020 Hb_000062_530 Hb_000062_530 Hb_012362_030--Hb_000062_530 Hb_029510_100 Hb_029510_100 Hb_012362_030--Hb_029510_100 Hb_147245_010 Hb_147245_010 Hb_012362_030--Hb_147245_010 Hb_000008_190 Hb_000008_190 Hb_012362_030--Hb_000008_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.19953 4.44426 8.08208 25.1769 1.96916 2.8522
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.09748 8.18996 5.93502 7.04977 5.74931

CAGE analysis