Hb_122636_010

Information

Type -
Description -
Location Contig122636: 791-1270
Sequence    

Annotation

kegg
ID pop:POPTR_0014s15330g
description POPTRDRAFT_732264; dienelactone hydrolase family protein
nr
ID XP_002321135.1
description dienelactone hydrolase family protein [Populus trichocarpa]
swissprot
ID Q7DFU6
description Putative uncharacterized protein YghX OS=Escherichia coli (strain K12) GN=yghX PE=5 SV=3
trembl
ID B9IAH2
description Dienelactone hydrolase family protein OS=Populus trichocarpa GN=POPTR_0014s15330g PE=4 SV=1
Gene Ontology
ID GO:0016787
description carboxymethylenebutenolidase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_122636_010 0.0 - - dienelactone hydrolase family protein [Populus trichocarpa]
2 Hb_006634_110 0.0946279448 - - BnaC04g40780D [Brassica napus]
3 Hb_000671_130 0.0981608461 - - PREDICTED: CMP-sialic acid transporter 2 isoform X2 [Jatropha curcas]
4 Hb_002660_110 0.111545054 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
5 Hb_003207_150 0.1266982728 - - PREDICTED: SPX domain-containing membrane protein At4g22990-like [Jatropha curcas]
6 Hb_001217_010 0.1289466309 - - hypothetical protein JCGZ_04022 [Jatropha curcas]
7 Hb_100137_010 0.1334421396 - - hypothetical protein JCGZ_17848 [Jatropha curcas]
8 Hb_000796_020 0.1350487399 - - ADP-ribosylation factor [Phaseolus vulgaris]
9 Hb_010577_010 0.1387633777 - - PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase-like [Populus euphratica]
10 Hb_030992_010 0.1390255069 - - acetylornithine aminotransferase, putative [Ricinus communis]
11 Hb_000008_190 0.1403104979 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
12 Hb_001894_070 0.140774673 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 isoform X1 [Jatropha curcas]
13 Hb_001999_100 0.1415123623 - - PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
14 Hb_000683_100 0.1424555695 - - hypothetical protein JCGZ_22137 [Jatropha curcas]
15 Hb_091349_010 0.1456098989 - - hypothetical protein EUGRSUZ_C02287 [Eucalyptus grandis]
16 Hb_000177_110 0.1479562231 - - PREDICTED: uncharacterized protein LOC105642063 [Jatropha curcas]
17 Hb_002760_050 0.1484888053 - - conserved hypothetical protein [Ricinus communis]
18 Hb_048702_010 0.1531455299 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X1 [Jatropha curcas]
19 Hb_000107_110 0.1546556941 - - nucleic acid binding protein, putative [Ricinus communis]
20 Hb_003994_300 0.1549889738 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_122636_010 Hb_122636_010 Hb_006634_110 Hb_006634_110 Hb_122636_010--Hb_006634_110 Hb_000671_130 Hb_000671_130 Hb_122636_010--Hb_000671_130 Hb_002660_110 Hb_002660_110 Hb_122636_010--Hb_002660_110 Hb_003207_150 Hb_003207_150 Hb_122636_010--Hb_003207_150 Hb_001217_010 Hb_001217_010 Hb_122636_010--Hb_001217_010 Hb_100137_010 Hb_100137_010 Hb_122636_010--Hb_100137_010 Hb_048702_010 Hb_048702_010 Hb_006634_110--Hb_048702_010 Hb_006634_110--Hb_100137_010 Hb_010577_010 Hb_010577_010 Hb_006634_110--Hb_010577_010 Hb_053709_040 Hb_053709_040 Hb_006634_110--Hb_053709_040 Hb_006634_110--Hb_000671_130 Hb_091349_010 Hb_091349_010 Hb_000671_130--Hb_091349_010 Hb_003207_020 Hb_003207_020 Hb_000671_130--Hb_003207_020 Hb_033152_070 Hb_033152_070 Hb_000671_130--Hb_033152_070 Hb_000107_110 Hb_000107_110 Hb_000671_130--Hb_000107_110 Hb_048476_060 Hb_048476_060 Hb_000671_130--Hb_048476_060 Hb_003052_180 Hb_003052_180 Hb_002660_110--Hb_003052_180 Hb_000622_350 Hb_000622_350 Hb_002660_110--Hb_000622_350 Hb_000008_190 Hb_000008_190 Hb_002660_110--Hb_000008_190 Hb_003071_070 Hb_003071_070 Hb_002660_110--Hb_003071_070 Hb_001609_040 Hb_001609_040 Hb_002660_110--Hb_001609_040 Hb_000177_110 Hb_000177_110 Hb_003207_150--Hb_000177_110 Hb_003207_150--Hb_053709_040 Hb_034726_010 Hb_034726_010 Hb_003207_150--Hb_034726_010 Hb_001366_170 Hb_001366_170 Hb_003207_150--Hb_001366_170 Hb_003207_150--Hb_000671_130 Hb_001217_010--Hb_100137_010 Hb_188313_010 Hb_188313_010 Hb_001217_010--Hb_188313_010 Hb_002760_050 Hb_002760_050 Hb_001217_010--Hb_002760_050 Hb_000125_020 Hb_000125_020 Hb_001217_010--Hb_000125_020 Hb_000291_160 Hb_000291_160 Hb_001217_010--Hb_000291_160 Hb_004466_060 Hb_004466_060 Hb_100137_010--Hb_004466_060 Hb_100137_010--Hb_048702_010 Hb_002611_030 Hb_002611_030 Hb_100137_010--Hb_002611_030 Hb_000077_290 Hb_000077_290 Hb_100137_010--Hb_000077_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.4774 38.6184 54.4003 399.099 27.6214 64.739
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
49.7001 62.8509 48.5126 40.6935 97.5861

CAGE analysis