Hb_000177_110

Information

Type -
Description -
Location Contig177: 239281-239781
Sequence    

Annotation

kegg
ID rcu:RCOM_1310520
description hypothetical protein
nr
ID XP_012082145.1
description PREDICTED: uncharacterized protein LOC105642063 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K324
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18374 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000177_110 0.0 - - PREDICTED: uncharacterized protein LOC105642063 [Jatropha curcas]
2 Hb_003207_150 0.0812404747 - - PREDICTED: SPX domain-containing membrane protein At4g22990-like [Jatropha curcas]
3 Hb_034726_010 0.1203577735 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Jatropha curcas]
4 Hb_000424_030 0.1340471891 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007483_060 0.1355182531 desease resistance Gene Name: ABC_membrane multidrug resistance protein 1, 2, putative [Ricinus communis]
6 Hb_002217_500 0.1404601362 - - hypothetical protein JCGZ_19014 [Jatropha curcas]
7 Hb_000671_130 0.1424215477 - - PREDICTED: CMP-sialic acid transporter 2 isoform X2 [Jatropha curcas]
8 Hb_053709_040 0.1441458667 - - putative actin-97 protein [Linum usitatissimum]
9 Hb_122636_010 0.1479562231 - - dienelactone hydrolase family protein [Populus trichocarpa]
10 Hb_030992_010 0.1525393999 - - acetylornithine aminotransferase, putative [Ricinus communis]
11 Hb_000928_120 0.1572468364 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
12 Hb_147245_010 0.1598006009 - - casein kinase, putative [Ricinus communis]
13 Hb_006925_050 0.1604095396 - - PREDICTED: inactive rhomboid protein 1-like [Jatropha curcas]
14 Hb_104571_010 0.1610737848 - - PREDICTED: metal transporter Nramp1 [Jatropha curcas]
15 Hb_000098_170 0.1613518169 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
16 Hb_001366_170 0.1628703093 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
17 Hb_000935_040 0.1630528265 - - Uncharacterized protein isoform 2 [Theobroma cacao]
18 Hb_003680_030 0.1640804014 - - PREDICTED: aspartic proteinase-like protein 2 isoform X3 [Jatropha curcas]
19 Hb_000246_130 0.1646845337 - - tubulin alpha chain, putative [Ricinus communis]
20 Hb_002217_320 0.1652439188 - - PREDICTED: probable O-acetyltransferase CAS1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000177_110 Hb_000177_110 Hb_003207_150 Hb_003207_150 Hb_000177_110--Hb_003207_150 Hb_034726_010 Hb_034726_010 Hb_000177_110--Hb_034726_010 Hb_000424_030 Hb_000424_030 Hb_000177_110--Hb_000424_030 Hb_007483_060 Hb_007483_060 Hb_000177_110--Hb_007483_060 Hb_002217_500 Hb_002217_500 Hb_000177_110--Hb_002217_500 Hb_000671_130 Hb_000671_130 Hb_000177_110--Hb_000671_130 Hb_053709_040 Hb_053709_040 Hb_003207_150--Hb_053709_040 Hb_003207_150--Hb_034726_010 Hb_001366_170 Hb_001366_170 Hb_003207_150--Hb_001366_170 Hb_003207_150--Hb_000671_130 Hb_122636_010 Hb_122636_010 Hb_003207_150--Hb_122636_010 Hb_034726_010--Hb_053709_040 Hb_001369_630 Hb_001369_630 Hb_034726_010--Hb_001369_630 Hb_001102_160 Hb_001102_160 Hb_034726_010--Hb_001102_160 Hb_034726_010--Hb_001366_170 Hb_006829_070 Hb_006829_070 Hb_000424_030--Hb_006829_070 Hb_000603_020 Hb_000603_020 Hb_000424_030--Hb_000603_020 Hb_000271_220 Hb_000271_220 Hb_000424_030--Hb_000271_220 Hb_002217_320 Hb_002217_320 Hb_000424_030--Hb_002217_320 Hb_000622_330 Hb_000622_330 Hb_000424_030--Hb_000622_330 Hb_006925_050 Hb_006925_050 Hb_000424_030--Hb_006925_050 Hb_002316_080 Hb_002316_080 Hb_007483_060--Hb_002316_080 Hb_000098_170 Hb_000098_170 Hb_007483_060--Hb_000098_170 Hb_118939_010 Hb_118939_010 Hb_007483_060--Hb_118939_010 Hb_007483_060--Hb_003207_150 Hb_007483_060--Hb_053709_040 Hb_001474_020 Hb_001474_020 Hb_002217_500--Hb_001474_020 Hb_003975_010 Hb_003975_010 Hb_002217_500--Hb_003975_010 Hb_002046_060 Hb_002046_060 Hb_002217_500--Hb_002046_060 Hb_001691_040 Hb_001691_040 Hb_002217_500--Hb_001691_040 Hb_002450_030 Hb_002450_030 Hb_002217_500--Hb_002450_030 Hb_023344_110 Hb_023344_110 Hb_002217_500--Hb_023344_110 Hb_000671_130--Hb_122636_010 Hb_091349_010 Hb_091349_010 Hb_000671_130--Hb_091349_010 Hb_003207_020 Hb_003207_020 Hb_000671_130--Hb_003207_020 Hb_033152_070 Hb_033152_070 Hb_000671_130--Hb_033152_070 Hb_000107_110 Hb_000107_110 Hb_000671_130--Hb_000107_110 Hb_048476_060 Hb_048476_060 Hb_000671_130--Hb_048476_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.358908 2.11602 3.29637 10.9022 0.829547 0.978134
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.936415 2.10189 0.890573 1.00467 3.34149

CAGE analysis