Hb_118939_010

Information

Type -
Description -
Location Contig118939: 115-916
Sequence    

Annotation

kegg
ID rcu:RCOM_1497090
description protein binding protein, putative
nr
ID XP_002510840.1
description protein binding protein, putative [Ricinus communis]
swissprot
ID Q0WUQ1
description BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana GN=BAG1 PE=1 SV=1
trembl
ID B9R9G5
description Protein binding protein, putative OS=Ricinus communis GN=RCOM_1497090 PE=4 SV=1
Gene Ontology
ID GO:0051087
description bag family molecular chaperone regulator 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118939_010 0.0 - - protein binding protein, putative [Ricinus communis]
2 Hb_012286_060 0.1283271589 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
3 Hb_005348_150 0.1336648049 - - PREDICTED: actin-100-like [Jatropha curcas]
4 Hb_007044_090 0.1426294831 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
5 Hb_001579_300 0.1444424436 - - PREDICTED: probable polygalacturonase At1g80170 [Jatropha curcas]
6 Hb_006925_050 0.1451572426 - - PREDICTED: inactive rhomboid protein 1-like [Jatropha curcas]
7 Hb_007483_060 0.1470423399 desease resistance Gene Name: ABC_membrane multidrug resistance protein 1, 2, putative [Ricinus communis]
8 Hb_002026_020 0.150528814 - - hypothetical protein POPTR_0012s129501g, partial [Populus trichocarpa]
9 Hb_017439_010 0.1513521084 - - putative actin-97 protein [Linum usitatissimum]
10 Hb_119583_020 0.1554694429 - - PREDICTED: uncharacterized protein LOC105628090 [Jatropha curcas]
11 Hb_000424_030 0.157337167 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001366_170 0.1589853221 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
13 Hb_004730_020 0.1614088593 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
14 Hb_002374_270 0.1636350763 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000098_170 0.1647028889 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
16 Hb_053709_040 0.1648885868 - - putative actin-97 protein [Linum usitatissimum]
17 Hb_000030_020 0.1667132165 - - PREDICTED: uncharacterized protein LOC105123549 [Populus euphratica]
18 Hb_003964_080 0.1685405431 - - PREDICTED: probable methyltransferase PMT5 [Jatropha curcas]
19 Hb_005511_130 0.168956225 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
20 Hb_029253_010 0.171954096 - - PREDICTED: KH domain-containing protein SPIN1-like [Jatropha curcas]

Gene co-expression network

sample Hb_118939_010 Hb_118939_010 Hb_012286_060 Hb_012286_060 Hb_118939_010--Hb_012286_060 Hb_005348_150 Hb_005348_150 Hb_118939_010--Hb_005348_150 Hb_007044_090 Hb_007044_090 Hb_118939_010--Hb_007044_090 Hb_001579_300 Hb_001579_300 Hb_118939_010--Hb_001579_300 Hb_006925_050 Hb_006925_050 Hb_118939_010--Hb_006925_050 Hb_007483_060 Hb_007483_060 Hb_118939_010--Hb_007483_060 Hb_000030_020 Hb_000030_020 Hb_012286_060--Hb_000030_020 Hb_000963_050 Hb_000963_050 Hb_012286_060--Hb_000963_050 Hb_012286_060--Hb_005348_150 Hb_008511_040 Hb_008511_040 Hb_012286_060--Hb_008511_040 Hb_143629_120 Hb_143629_120 Hb_012286_060--Hb_143629_120 Hb_005348_150--Hb_000030_020 Hb_119583_020 Hb_119583_020 Hb_005348_150--Hb_119583_020 Hb_000599_330 Hb_000599_330 Hb_005348_150--Hb_000599_330 Hb_000388_080 Hb_000388_080 Hb_005348_150--Hb_000388_080 Hb_005511_130 Hb_005511_130 Hb_007044_090--Hb_005511_130 Hb_000984_220 Hb_000984_220 Hb_007044_090--Hb_000984_220 Hb_029253_010 Hb_029253_010 Hb_007044_090--Hb_029253_010 Hb_007044_090--Hb_006925_050 Hb_003964_080 Hb_003964_080 Hb_007044_090--Hb_003964_080 Hb_000282_050 Hb_000282_050 Hb_007044_090--Hb_000282_050 Hb_004730_020 Hb_004730_020 Hb_001579_300--Hb_004730_020 Hb_000152_440 Hb_000152_440 Hb_001579_300--Hb_000152_440 Hb_001579_300--Hb_005511_130 Hb_001579_300--Hb_000388_080 Hb_001579_300--Hb_006925_050 Hb_000527_080 Hb_000527_080 Hb_001579_300--Hb_000527_080 Hb_006925_050--Hb_029253_010 Hb_006925_050--Hb_005511_130 Hb_005357_110 Hb_005357_110 Hb_006925_050--Hb_005357_110 Hb_006925_050--Hb_004730_020 Hb_006829_070 Hb_006829_070 Hb_006925_050--Hb_006829_070 Hb_001847_050 Hb_001847_050 Hb_006925_050--Hb_001847_050 Hb_000177_110 Hb_000177_110 Hb_007483_060--Hb_000177_110 Hb_002316_080 Hb_002316_080 Hb_007483_060--Hb_002316_080 Hb_000098_170 Hb_000098_170 Hb_007483_060--Hb_000098_170 Hb_003207_150 Hb_003207_150 Hb_007483_060--Hb_003207_150 Hb_053709_040 Hb_053709_040 Hb_007483_060--Hb_053709_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.13636 14.6771 47.2646 75.9968 3.54906 6.18652
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.18385 9.69633 7.39599 2.85237 15.4599

CAGE analysis