Hb_000527_080

Information

Type -
Description -
Location Contig527: 93378-94343
Sequence    

Annotation

kegg
ID rcu:RCOM_1062300
description Monoglyceride lipase, putative (EC:3.1.1.23)
nr
ID XP_012091547.1
description PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
swissprot
ID Q9C942
description Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1
trembl
ID A0A067JDS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21389 PE=4 SV=1
Gene Ontology
ID GO:0005794
description caffeoylshikimate esterase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47040: 93267-94368
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000527_080 0.0 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
2 Hb_004545_080 0.0953475171 - - protein with unknown function [Ricinus communis]
3 Hb_004730_020 0.0994086032 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
4 Hb_001450_040 0.1025349675 - - PREDICTED: tubulin alpha-2 chain [Jatropha curcas]
5 Hb_000689_050 0.113893569 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003894_030 0.1196292397 - - plant sec1, putative [Ricinus communis]
7 Hb_003740_020 0.123311144 - - PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X2 [Jatropha curcas]
8 Hb_012180_060 0.1243567875 - - peptidase, putative [Ricinus communis]
9 Hb_000032_410 0.1267547846 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
10 Hb_001579_300 0.1268954722 - - PREDICTED: probable polygalacturonase At1g80170 [Jatropha curcas]
11 Hb_021409_070 0.1273099943 - - PREDICTED: transcription factor bHLH157 isoform X1 [Jatropha curcas]
12 Hb_005511_130 0.127419579 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
13 Hb_012807_150 0.132092385 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
14 Hb_006120_060 0.1335952323 - - O-acetyltransferase family protein isoform 1 [Theobroma cacao]
15 Hb_000076_250 0.1354016075 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003050_360 0.1371521118 - - PREDICTED: tobamovirus multiplication protein 1 isoform X2 [Jatropha curcas]
17 Hb_001847_050 0.1371566393 - - hypothetical protein CISIN_1g019843mg [Citrus sinensis]
18 Hb_008025_010 0.1381975185 - - PREDICTED: lysosomal beta glucosidase-like [Musa acuminata subsp. malaccensis]
19 Hb_003160_070 0.1384525472 - - PREDICTED: VIN3-like protein 1 [Jatropha curcas]
20 Hb_014497_010 0.1389244063 - - PREDICTED: uncharacterized protein LOC105635153 [Jatropha curcas]

Gene co-expression network

sample Hb_000527_080 Hb_000527_080 Hb_004545_080 Hb_004545_080 Hb_000527_080--Hb_004545_080 Hb_004730_020 Hb_004730_020 Hb_000527_080--Hb_004730_020 Hb_001450_040 Hb_001450_040 Hb_000527_080--Hb_001450_040 Hb_000689_050 Hb_000689_050 Hb_000527_080--Hb_000689_050 Hb_003894_030 Hb_003894_030 Hb_000527_080--Hb_003894_030 Hb_003740_020 Hb_003740_020 Hb_000527_080--Hb_003740_020 Hb_000032_410 Hb_000032_410 Hb_004545_080--Hb_000032_410 Hb_003050_360 Hb_003050_360 Hb_004545_080--Hb_003050_360 Hb_002942_140 Hb_002942_140 Hb_004545_080--Hb_002942_140 Hb_004545_080--Hb_000689_050 Hb_003175_070 Hb_003175_070 Hb_004545_080--Hb_003175_070 Hb_005511_130 Hb_005511_130 Hb_004730_020--Hb_005511_130 Hb_001579_300 Hb_001579_300 Hb_004730_020--Hb_001579_300 Hb_004730_020--Hb_000032_410 Hb_005357_110 Hb_005357_110 Hb_004730_020--Hb_005357_110 Hb_004730_020--Hb_003740_020 Hb_000932_050 Hb_000932_050 Hb_001450_040--Hb_000932_050 Hb_003408_010 Hb_003408_010 Hb_001450_040--Hb_003408_010 Hb_031284_030 Hb_031284_030 Hb_001450_040--Hb_031284_030 Hb_000023_110 Hb_000023_110 Hb_001450_040--Hb_000023_110 Hb_012807_150 Hb_012807_150 Hb_001450_040--Hb_012807_150 Hb_000689_050--Hb_003050_360 Hb_005074_040 Hb_005074_040 Hb_000689_050--Hb_005074_040 Hb_014497_010 Hb_014497_010 Hb_000689_050--Hb_014497_010 Hb_000996_080 Hb_000996_080 Hb_000689_050--Hb_000996_080 Hb_006120_060 Hb_006120_060 Hb_000689_050--Hb_006120_060 Hb_003894_030--Hb_003740_020 Hb_013405_070 Hb_013405_070 Hb_003894_030--Hb_013405_070 Hb_002374_270 Hb_002374_270 Hb_003894_030--Hb_002374_270 Hb_029253_010 Hb_029253_010 Hb_003894_030--Hb_029253_010 Hb_000000_480 Hb_000000_480 Hb_003894_030--Hb_000000_480 Hb_003740_020--Hb_005357_110 Hb_003740_020--Hb_029253_010 Hb_021409_070 Hb_021409_070 Hb_003740_020--Hb_021409_070 Hb_003740_020--Hb_005511_130 Hb_003740_020--Hb_000032_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.71736 4.2097 24.6899 23.8771 2.12478 2.7316
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32292 1.53985 3.36266 6.4658 14.0972

CAGE analysis