Hb_007044_090

Information

Type -
Description -
Location Contig7044: 49169-55026
Sequence    

Annotation

kegg
ID rcu:RCOM_0279610
description carboxylesterase, putative
nr
ID XP_012088153.1
description PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
swissprot
ID Q94AS5
description Isoprenylcysteine alpha-carbonyl methylesterase ICME OS=Arabidopsis thaliana GN=ICME PE=2 SV=1
trembl
ID A0A067JK54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25662 PE=4 SV=1
Gene Ontology
ID GO:0016787
description isoprenylcysteine alpha-carbonyl methylesterase icme-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55012: 47823-48362 , PASA_asmbl_55013: 47823-51237 , PASA_asmbl_55015: 50884-55082 , PASA_asmbl_55016: 50884-55082 , PASA_asmbl_55017: 50884-55082 , PASA_asmbl_55018: 50884-55082 , PASA_asmbl_55019: 48791-49036
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007044_090 0.0 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
2 Hb_005511_130 0.1273232702 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
3 Hb_000984_220 0.1335725828 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
4 Hb_029253_010 0.1365536621 - - PREDICTED: KH domain-containing protein SPIN1-like [Jatropha curcas]
5 Hb_006925_050 0.1387355594 - - PREDICTED: inactive rhomboid protein 1-like [Jatropha curcas]
6 Hb_003964_080 0.1392750802 - - PREDICTED: probable methyltransferase PMT5 [Jatropha curcas]
7 Hb_000282_050 0.1415844646 - - calcineurin B, putative [Ricinus communis]
8 Hb_001188_100 0.1422319829 - - hypothetical protein JCGZ_05568 [Jatropha curcas]
9 Hb_118939_010 0.1426294831 - - protein binding protein, putative [Ricinus communis]
10 Hb_000800_020 0.1427514979 - - PREDICTED: 3-phosphoinositide-dependent protein kinase 2 [Jatropha curcas]
11 Hb_001155_050 0.1430395832 - - PREDICTED: KH domain-containing protein SPIN1-like [Jatropha curcas]
12 Hb_002374_270 0.1453742146 - - conserved hypothetical protein [Ricinus communis]
13 Hb_011671_340 0.1464260376 - - small GTPase [Hevea brasiliensis]
14 Hb_013405_070 0.146661883 - - ferric-chelate reductase, putative [Ricinus communis]
15 Hb_001123_110 0.1501266314 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000152_440 0.1529185381 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
17 Hb_004003_030 0.1533746183 - - conserved hypothetical protein [Ricinus communis]
18 Hb_021576_150 0.1546525343 - - PREDICTED: formin-like protein 18 [Jatropha curcas]
19 Hb_119583_020 0.1547000244 - - PREDICTED: uncharacterized protein LOC105628090 [Jatropha curcas]
20 Hb_000256_080 0.1549932718 - - PREDICTED: deSI-like protein At4g17486 [Jatropha curcas]

Gene co-expression network

sample Hb_007044_090 Hb_007044_090 Hb_005511_130 Hb_005511_130 Hb_007044_090--Hb_005511_130 Hb_000984_220 Hb_000984_220 Hb_007044_090--Hb_000984_220 Hb_029253_010 Hb_029253_010 Hb_007044_090--Hb_029253_010 Hb_006925_050 Hb_006925_050 Hb_007044_090--Hb_006925_050 Hb_003964_080 Hb_003964_080 Hb_007044_090--Hb_003964_080 Hb_000282_050 Hb_000282_050 Hb_007044_090--Hb_000282_050 Hb_004730_020 Hb_004730_020 Hb_005511_130--Hb_004730_020 Hb_003687_080 Hb_003687_080 Hb_005511_130--Hb_003687_080 Hb_000032_410 Hb_000032_410 Hb_005511_130--Hb_000032_410 Hb_005511_130--Hb_000984_220 Hb_000915_130 Hb_000915_130 Hb_005511_130--Hb_000915_130 Hb_005357_110 Hb_005357_110 Hb_005511_130--Hb_005357_110 Hb_000984_220--Hb_004730_020 Hb_000800_020 Hb_000800_020 Hb_000984_220--Hb_000800_020 Hb_001160_110 Hb_001160_110 Hb_000984_220--Hb_001160_110 Hb_000984_220--Hb_003687_080 Hb_004158_050 Hb_004158_050 Hb_000984_220--Hb_004158_050 Hb_029253_010--Hb_005357_110 Hb_003740_020 Hb_003740_020 Hb_029253_010--Hb_003740_020 Hb_029253_010--Hb_000032_410 Hb_029253_010--Hb_006925_050 Hb_091318_010 Hb_091318_010 Hb_029253_010--Hb_091318_010 Hb_002374_270 Hb_002374_270 Hb_029253_010--Hb_002374_270 Hb_006925_050--Hb_005511_130 Hb_006925_050--Hb_005357_110 Hb_006925_050--Hb_004730_020 Hb_006829_070 Hb_006829_070 Hb_006925_050--Hb_006829_070 Hb_001847_050 Hb_001847_050 Hb_006925_050--Hb_001847_050 Hb_000753_160 Hb_000753_160 Hb_003964_080--Hb_000753_160 Hb_000134_120 Hb_000134_120 Hb_003964_080--Hb_000134_120 Hb_007919_110 Hb_007919_110 Hb_003964_080--Hb_007919_110 Hb_002217_320 Hb_002217_320 Hb_003964_080--Hb_002217_320 Hb_003964_080--Hb_005511_130 Hb_003964_080--Hb_002374_270 Hb_188281_030 Hb_188281_030 Hb_000282_050--Hb_188281_030 Hb_000622_130 Hb_000622_130 Hb_000282_050--Hb_000622_130 Hb_007741_130 Hb_007741_130 Hb_000282_050--Hb_007741_130 Hb_124677_030 Hb_124677_030 Hb_000282_050--Hb_124677_030 Hb_004567_010 Hb_004567_010 Hb_000282_050--Hb_004567_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.14566 3.59437 12.0408 12.2588 1.3182 1.59285
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.99863 3.23867 3.10209 1.22152 3.71176

CAGE analysis