Hb_000984_310

Information

Type -
Description -
Location Contig984: 314994-324813
Sequence    

Annotation

kegg
ID tcc:TCM_034624
description Hydrolase, hydrolyzing O-glycosyl compounds, putative
nr
ID XP_007018395.1
description Hydrolase, hydrolyzing O-glycosyl compounds, putative [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061FE65
description Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Theobroma cacao GN=TCM_034624 PE=4 SV=1
Gene Ontology
ID GO:0016787
description hydrolyzing o-glycosyl

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64594: 310270-314455 , PASA_asmbl_64597: 319198-319538 , PASA_asmbl_64598: 320333-321228 , PASA_asmbl_64599: 321295-322684 , PASA_asmbl_64600: 323990-324218
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000984_310 0.0 - - Hydrolase, hydrolyzing O-glycosyl compounds, putative [Theobroma cacao]
2 Hb_001486_190 0.0962954188 - - hypothetical protein JCGZ_02702 [Jatropha curcas]
3 Hb_001051_070 0.1001128637 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
4 Hb_012651_010 0.1001794914 - - PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]
5 Hb_000836_280 0.1027811022 - - PREDICTED: protein BPS1, chloroplastic [Jatropha curcas]
6 Hb_000679_100 0.1033382047 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
7 Hb_000140_350 0.1065604056 - - conserved hypothetical protein [Ricinus communis]
8 Hb_007286_020 0.1067454728 - - hypothetical protein L484_010675 [Morus notabilis]
9 Hb_001481_150 0.1101169168 - - hypothetical protein POPTR_0001s15440g [Populus trichocarpa]
10 Hb_002781_030 0.1122906866 - - protein binding protein, putative [Ricinus communis]
11 Hb_001946_180 0.1155613027 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005183_170 0.119698101 - - PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curcas]
13 Hb_013057_020 0.1197136877 - - PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Jatropha curcas]
14 Hb_000679_230 0.120370304 - - PREDICTED: serine/threonine-protein kinase PRP4 homolog [Jatropha curcas]
15 Hb_000477_100 0.1206066446 - - PREDICTED: GDP-mannose transporter GONST4 [Jatropha curcas]
16 Hb_000429_050 0.1220781967 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
17 Hb_000023_300 0.1226268849 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
18 Hb_007153_050 0.1232505656 - - PREDICTED: transmembrane 9 superfamily member 8 [Jatropha curcas]
19 Hb_000748_030 0.1237534784 - - ATP binding protein, putative [Ricinus communis]
20 Hb_000359_090 0.1241830345 - - PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial-like [Malus domestica]

Gene co-expression network

sample Hb_000984_310 Hb_000984_310 Hb_001486_190 Hb_001486_190 Hb_000984_310--Hb_001486_190 Hb_001051_070 Hb_001051_070 Hb_000984_310--Hb_001051_070 Hb_012651_010 Hb_012651_010 Hb_000984_310--Hb_012651_010 Hb_000836_280 Hb_000836_280 Hb_000984_310--Hb_000836_280 Hb_000679_100 Hb_000679_100 Hb_000984_310--Hb_000679_100 Hb_000140_350 Hb_000140_350 Hb_000984_310--Hb_000140_350 Hb_000748_030 Hb_000748_030 Hb_001486_190--Hb_000748_030 Hb_000853_200 Hb_000853_200 Hb_001486_190--Hb_000853_200 Hb_005183_170 Hb_005183_170 Hb_001486_190--Hb_005183_170 Hb_146051_010 Hb_146051_010 Hb_001486_190--Hb_146051_010 Hb_000172_100 Hb_000172_100 Hb_001486_190--Hb_000172_100 Hb_000477_100 Hb_000477_100 Hb_001051_070--Hb_000477_100 Hb_007286_020 Hb_007286_020 Hb_001051_070--Hb_007286_020 Hb_000023_300 Hb_000023_300 Hb_001051_070--Hb_000023_300 Hb_011214_160 Hb_011214_160 Hb_001051_070--Hb_011214_160 Hb_003998_040 Hb_003998_040 Hb_001051_070--Hb_003998_040 Hb_001051_070--Hb_000679_100 Hb_001946_180 Hb_001946_180 Hb_012651_010--Hb_001946_180 Hb_000002_480 Hb_000002_480 Hb_012651_010--Hb_000002_480 Hb_000890_230 Hb_000890_230 Hb_012651_010--Hb_000890_230 Hb_000429_050 Hb_000429_050 Hb_012651_010--Hb_000429_050 Hb_012651_010--Hb_000140_350 Hb_000836_280--Hb_000140_350 Hb_000208_280 Hb_000208_280 Hb_000836_280--Hb_000208_280 Hb_013057_020 Hb_013057_020 Hb_000836_280--Hb_013057_020 Hb_023344_150 Hb_023344_150 Hb_000836_280--Hb_023344_150 Hb_012114_100 Hb_012114_100 Hb_000836_280--Hb_012114_100 Hb_000146_040 Hb_000146_040 Hb_000836_280--Hb_000146_040 Hb_000085_260 Hb_000085_260 Hb_000679_100--Hb_000085_260 Hb_001097_040 Hb_001097_040 Hb_000679_100--Hb_001097_040 Hb_000679_100--Hb_007286_020 Hb_000679_100--Hb_000023_300 Hb_010042_030 Hb_010042_030 Hb_000679_100--Hb_010042_030 Hb_000140_350--Hb_000146_040 Hb_000140_350--Hb_000208_280 Hb_004102_170 Hb_004102_170 Hb_000140_350--Hb_004102_170 Hb_000130_180 Hb_000130_180 Hb_000140_350--Hb_000130_180 Hb_000140_350--Hb_000477_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.88958 5.37315 2.56584 13.8954 2.8922 3.46554
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.48778 2.43448 4.97961 4.17692 3.76239

CAGE analysis