Hb_146051_010

Information

Type -
Description -
Location Contig146051: 2560-5549
Sequence    

Annotation

kegg
ID rcu:RCOM_1083710
description hydrolase, hydrolyzing O-glycosyl compounds, putative
nr
ID XP_002515055.1
description hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RMT6
description Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_1083710 PE=3 SV=1
Gene Ontology
ID GO:0004553
description hydrolyzing o-glycosyl

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11873: 3733-4379
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146051_010 0.0 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
2 Hb_007409_040 0.0831166474 - - actin family protein [Populus trichocarpa]
3 Hb_001157_200 0.0978326642 - - PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]
4 Hb_032969_020 0.1009419898 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000172_100 0.1056680364 - - PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal [Jatropha curcas]
6 Hb_003544_030 0.1077631833 - - PREDICTED: citrate synthase, glyoxysomal [Jatropha curcas]
7 Hb_006452_120 0.1102373302 - - PREDICTED: protein FAM188A [Jatropha curcas]
8 Hb_010515_020 0.1147125945 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]
9 Hb_001217_050 0.1147140377 - - actin binding protein, putative [Ricinus communis]
10 Hb_000152_320 0.1170035554 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004019_120 0.1171853596 - - PREDICTED: conserved oligomeric Golgi complex subunit 1 [Jatropha curcas]
12 Hb_004030_080 0.1172135491 - - hypothetical protein JCGZ_25110 [Jatropha curcas]
13 Hb_001500_100 0.1177907976 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000123_180 0.1183035852 - - 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
15 Hb_007904_130 0.1184176065 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
16 Hb_000109_180 0.1202610312 - - PREDICTED: AP-1 complex subunit gamma-2-like [Jatropha curcas]
17 Hb_000984_170 0.1202695704 - - PREDICTED: KH domain-containing protein At4g18375-like [Jatropha curcas]
18 Hb_000313_120 0.1205571273 - - PREDICTED: ALG-2 interacting protein X [Jatropha curcas]
19 Hb_011016_050 0.1208495164 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 isoform X1 [Jatropha curcas]
20 Hb_000453_250 0.1210747072 - - PREDICTED: uncharacterized protein LOC105637185 [Jatropha curcas]

Gene co-expression network

sample Hb_146051_010 Hb_146051_010 Hb_007409_040 Hb_007409_040 Hb_146051_010--Hb_007409_040 Hb_001157_200 Hb_001157_200 Hb_146051_010--Hb_001157_200 Hb_032969_020 Hb_032969_020 Hb_146051_010--Hb_032969_020 Hb_000172_100 Hb_000172_100 Hb_146051_010--Hb_000172_100 Hb_003544_030 Hb_003544_030 Hb_146051_010--Hb_003544_030 Hb_006452_120 Hb_006452_120 Hb_146051_010--Hb_006452_120 Hb_006006_040 Hb_006006_040 Hb_007409_040--Hb_006006_040 Hb_001454_230 Hb_001454_230 Hb_007409_040--Hb_001454_230 Hb_001500_100 Hb_001500_100 Hb_007409_040--Hb_001500_100 Hb_001051_070 Hb_001051_070 Hb_007409_040--Hb_001051_070 Hb_001114_110 Hb_001114_110 Hb_007409_040--Hb_001114_110 Hb_132880_040 Hb_132880_040 Hb_001157_200--Hb_132880_040 Hb_001157_200--Hb_003544_030 Hb_007747_080 Hb_007747_080 Hb_001157_200--Hb_007747_080 Hb_000984_170 Hb_000984_170 Hb_001157_200--Hb_000984_170 Hb_001157_200--Hb_006452_120 Hb_005663_110 Hb_005663_110 Hb_001157_200--Hb_005663_110 Hb_032969_020--Hb_007409_040 Hb_005396_150 Hb_005396_150 Hb_032969_020--Hb_005396_150 Hb_032969_020--Hb_001500_100 Hb_007336_010 Hb_007336_010 Hb_032969_020--Hb_007336_010 Hb_000140_290 Hb_000140_290 Hb_032969_020--Hb_000140_290 Hb_004725_050 Hb_004725_050 Hb_000172_100--Hb_004725_050 Hb_000291_150 Hb_000291_150 Hb_000172_100--Hb_000291_150 Hb_066920_030 Hb_066920_030 Hb_000172_100--Hb_066920_030 Hb_003607_130 Hb_003607_130 Hb_000172_100--Hb_003607_130 Hb_003617_020 Hb_003617_020 Hb_000172_100--Hb_003617_020 Hb_000072_120 Hb_000072_120 Hb_000172_100--Hb_000072_120 Hb_000327_250 Hb_000327_250 Hb_003544_030--Hb_000327_250 Hb_003544_030--Hb_005663_110 Hb_001434_080 Hb_001434_080 Hb_003544_030--Hb_001434_080 Hb_016347_010 Hb_016347_010 Hb_003544_030--Hb_016347_010 Hb_003544_030--Hb_006452_120 Hb_017387_010 Hb_017387_010 Hb_003544_030--Hb_017387_010 Hb_010515_020 Hb_010515_020 Hb_006452_120--Hb_010515_020 Hb_004030_080 Hb_004030_080 Hb_006452_120--Hb_004030_080 Hb_000574_450 Hb_000574_450 Hb_006452_120--Hb_000574_450 Hb_008748_030 Hb_008748_030 Hb_006452_120--Hb_008748_030 Hb_006452_120--Hb_000984_170 Hb_000012_310 Hb_000012_310 Hb_006452_120--Hb_000012_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.22783 6.50434 2.86381 9.25195 4.54567 2.33617
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.32094 2.62265 6.91009 7.21693 4.83259

CAGE analysis