Hb_001210_040

Information

Type -
Description -
Location Contig1210: 24315-25690
Sequence    

Annotation

kegg
ID rcu:RCOM_0896860
description sulfate transporter, putative
nr
ID XP_012073275.1
description PREDICTED: molybdate transporter 2 [Jatropha curcas]
swissprot
ID Q0WP36
description Molybdate transporter 2 OS=Arabidopsis thaliana GN=MOT2 PE=1 SV=2
trembl
ID A0A067KZ93
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06215 PE=4 SV=1
Gene Ontology
ID GO:0016021
description molybdate transporter 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001210_040 0.0 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
2 Hb_002400_060 0.0797807953 - - PREDICTED: putative clathrin assembly protein At2g25430 [Jatropha curcas]
3 Hb_021297_020 0.0924996442 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
4 Hb_003340_010 0.0951908036 - - PREDICTED: ubiquitin-activating enzyme E1 1 [Vitis vinifera]
5 Hb_027445_020 0.0956768772 - - PREDICTED: glycosylphosphatidylinositol anchor attachment 1 protein [Jatropha curcas]
6 Hb_001801_020 0.0999562755 - - PREDICTED: xylosyltransferase 1 [Jatropha curcas]
7 Hb_126976_010 0.100119049 - - -
8 Hb_009674_050 0.1035849585 - - Endosomal P24A protein precursor, putative [Ricinus communis]
9 Hb_000649_060 0.1051504752 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
10 Hb_000237_040 0.1080082223 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
11 Hb_000976_100 0.1081962395 - - eukaryotic translation elongation factor, putative [Ricinus communis]
12 Hb_007416_210 0.1127735256 - - PREDICTED: coatomer subunit beta-1 [Jatropha curcas]
13 Hb_015292_060 0.1144341187 - - PREDICTED: pentatricopeptide repeat-containing protein At5g38730 [Jatropha curcas]
14 Hb_003517_070 0.1152664283 - - PREDICTED: protein transport protein Sec24-like At3g07100 [Jatropha curcas]
15 Hb_000494_030 0.1155296268 - - PREDICTED: uncharacterized protein LOC105643196 [Jatropha curcas]
16 Hb_000674_010 0.116083763 - - PREDICTED: copper-transporting ATPase RAN1 isoform X1 [Jatropha curcas]
17 Hb_000941_150 0.1170500238 - - PREDICTED: uncharacterized protein LOC105637253 isoform X1 [Jatropha curcas]
18 Hb_002874_110 0.1178071791 - - PREDICTED: uncharacterized protein LOC105637451 [Jatropha curcas]
19 Hb_004917_010 0.1178434272 - - PREDICTED: U-box domain-containing protein 13-like [Jatropha curcas]
20 Hb_001366_270 0.1181072875 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]

Gene co-expression network

sample Hb_001210_040 Hb_001210_040 Hb_002400_060 Hb_002400_060 Hb_001210_040--Hb_002400_060 Hb_021297_020 Hb_021297_020 Hb_001210_040--Hb_021297_020 Hb_003340_010 Hb_003340_010 Hb_001210_040--Hb_003340_010 Hb_027445_020 Hb_027445_020 Hb_001210_040--Hb_027445_020 Hb_001801_020 Hb_001801_020 Hb_001210_040--Hb_001801_020 Hb_126976_010 Hb_126976_010 Hb_001210_040--Hb_126976_010 Hb_002400_060--Hb_001801_020 Hb_002311_130 Hb_002311_130 Hb_002400_060--Hb_002311_130 Hb_009674_050 Hb_009674_050 Hb_002400_060--Hb_009674_050 Hb_033642_060 Hb_033642_060 Hb_002400_060--Hb_033642_060 Hb_000265_140 Hb_000265_140 Hb_002400_060--Hb_000265_140 Hb_000649_060 Hb_000649_060 Hb_021297_020--Hb_000649_060 Hb_021297_020--Hb_027445_020 Hb_000674_010 Hb_000674_010 Hb_021297_020--Hb_000674_010 Hb_000701_030 Hb_000701_030 Hb_021297_020--Hb_000701_030 Hb_003058_200 Hb_003058_200 Hb_021297_020--Hb_003058_200 Hb_001226_130 Hb_001226_130 Hb_021297_020--Hb_001226_130 Hb_000890_070 Hb_000890_070 Hb_003340_010--Hb_000890_070 Hb_002874_110 Hb_002874_110 Hb_003340_010--Hb_002874_110 Hb_003517_070 Hb_003517_070 Hb_003340_010--Hb_003517_070 Hb_011537_060 Hb_011537_060 Hb_003340_010--Hb_011537_060 Hb_007933_040 Hb_007933_040 Hb_003340_010--Hb_007933_040 Hb_003340_010--Hb_000649_060 Hb_001369_360 Hb_001369_360 Hb_027445_020--Hb_001369_360 Hb_000237_040 Hb_000237_040 Hb_027445_020--Hb_000237_040 Hb_000976_100 Hb_000976_100 Hb_027445_020--Hb_000976_100 Hb_027445_020--Hb_002874_110 Hb_003097_140 Hb_003097_140 Hb_027445_020--Hb_003097_140 Hb_000237_050 Hb_000237_050 Hb_027445_020--Hb_000237_050 Hb_001801_020--Hb_033642_060 Hb_183086_030 Hb_183086_030 Hb_001801_020--Hb_183086_030 Hb_022250_010 Hb_022250_010 Hb_001801_020--Hb_022250_010 Hb_001801_020--Hb_126976_010 Hb_002817_060 Hb_002817_060 Hb_001801_020--Hb_002817_060 Hb_126976_010--Hb_002874_110 Hb_126976_010--Hb_000237_040 Hb_126976_010--Hb_000890_070 Hb_000809_230 Hb_000809_230 Hb_126976_010--Hb_000809_230 Hb_126976_010--Hb_000976_100 Hb_004679_030 Hb_004679_030 Hb_126976_010--Hb_004679_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.04323 8.78998 6.1076 20.1181 7.31841 6.66873
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.65137 2.32007 8.26853 15.4686 22.7789

CAGE analysis