Hb_000086_320

Information

Type -
Description -
Location Contig86: 259307-260713
Sequence    

Annotation

kegg
ID rcu:RCOM_0259070
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID KDP26503.1
description hypothetical protein JCGZ_17661 [Jatropha curcas]
swissprot
ID Q5PP26
description Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1
trembl
ID A0A067JUK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17661 PE=4 SV=1
Gene Ontology
ID GO:0016324
description piriformospora indica-insensitive protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_320 0.0 - - hypothetical protein JCGZ_17661 [Jatropha curcas]
2 Hb_000203_200 0.1771158685 - - Pollen allergen Che a 1 precursor, putative [Ricinus communis]
3 Hb_011344_200 0.1850812092 - - cytoplasmic ribosomal protein S13 [Panax ginseng]
4 Hb_004218_120 0.1861671735 - - PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X1 [Jatropha curcas]
5 Hb_000422_080 0.1867684828 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FB isoform X1 [Jatropha curcas]
6 Hb_000300_510 0.1899545443 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
7 Hb_001842_020 0.1901746424 - - PREDICTED: low molecular weight phosphotyrosine protein phosphatase [Jatropha curcas]
8 Hb_003910_050 0.1918721596 - - PREDICTED: uncharacterized protein LOC105646926 [Jatropha curcas]
9 Hb_000027_140 0.1933232942 - - PREDICTED: uncharacterized protein LOC105642063 [Jatropha curcas]
10 Hb_001160_100 0.1935473873 - - PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic [Jatropha curcas]
11 Hb_000186_300 0.1947682935 - - PREDICTED: malonyl-CoA decarboxylase, mitochondrial [Jatropha curcas]
12 Hb_132082_010 0.1994875829 - - hypothetical protein VITISV_030895 [Vitis vinifera]
13 Hb_000923_100 0.2000689103 - - chloride channel clc, putative [Ricinus communis]
14 Hb_004097_090 0.2018284808 - - PREDICTED: uncharacterized protein LOC105634517 [Jatropha curcas]
15 Hb_001196_040 0.2025210713 - - PREDICTED: uncharacterized protein LOC104100193 [Nicotiana tomentosiformis]
16 Hb_077549_010 0.2032807965 - - PREDICTED: uncharacterized protein LOC105644817 isoform X1 [Jatropha curcas]
17 Hb_000879_150 0.2034392922 - - conserved hypothetical protein [Ricinus communis]
18 Hb_025194_050 0.2039395709 - - PREDICTED: uncharacterized protein LOC105644851 isoform X1 [Jatropha curcas]
19 Hb_001675_140 0.2057029145 - - hypothetical protein L484_026216 [Morus notabilis]
20 Hb_007416_260 0.2064147552 - - PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Jatropha curcas]

Gene co-expression network

sample Hb_000086_320 Hb_000086_320 Hb_000203_200 Hb_000203_200 Hb_000086_320--Hb_000203_200 Hb_011344_200 Hb_011344_200 Hb_000086_320--Hb_011344_200 Hb_004218_120 Hb_004218_120 Hb_000086_320--Hb_004218_120 Hb_000422_080 Hb_000422_080 Hb_000086_320--Hb_000422_080 Hb_000300_510 Hb_000300_510 Hb_000086_320--Hb_000300_510 Hb_001842_020 Hb_001842_020 Hb_000086_320--Hb_001842_020 Hb_000923_100 Hb_000923_100 Hb_000203_200--Hb_000923_100 Hb_000922_320 Hb_000922_320 Hb_000203_200--Hb_000922_320 Hb_000327_200 Hb_000327_200 Hb_000203_200--Hb_000327_200 Hb_002281_010 Hb_002281_010 Hb_000203_200--Hb_002281_010 Hb_000979_140 Hb_000979_140 Hb_000203_200--Hb_000979_140 Hb_004052_110 Hb_004052_110 Hb_000203_200--Hb_004052_110 Hb_004449_180 Hb_004449_180 Hb_011344_200--Hb_004449_180 Hb_157023_020 Hb_157023_020 Hb_011344_200--Hb_157023_020 Hb_000035_160 Hb_000035_160 Hb_011344_200--Hb_000035_160 Hb_027472_140 Hb_027472_140 Hb_011344_200--Hb_027472_140 Hb_001726_080 Hb_001726_080 Hb_011344_200--Hb_001726_080 Hb_002092_120 Hb_002092_120 Hb_011344_200--Hb_002092_120 Hb_000203_270 Hb_000203_270 Hb_004218_120--Hb_000203_270 Hb_002325_060 Hb_002325_060 Hb_004218_120--Hb_002325_060 Hb_001135_030 Hb_001135_030 Hb_004218_120--Hb_001135_030 Hb_002849_070 Hb_002849_070 Hb_004218_120--Hb_002849_070 Hb_000200_170 Hb_000200_170 Hb_004218_120--Hb_000200_170 Hb_002876_210 Hb_002876_210 Hb_004218_120--Hb_002876_210 Hb_004943_040 Hb_004943_040 Hb_000422_080--Hb_004943_040 Hb_000414_080 Hb_000414_080 Hb_000422_080--Hb_000414_080 Hb_000487_370 Hb_000487_370 Hb_000422_080--Hb_000487_370 Hb_000342_170 Hb_000342_170 Hb_000422_080--Hb_000342_170 Hb_000283_140 Hb_000283_140 Hb_000422_080--Hb_000283_140 Hb_002249_080 Hb_002249_080 Hb_000422_080--Hb_002249_080 Hb_000000_310 Hb_000000_310 Hb_000300_510--Hb_000000_310 Hb_005192_010 Hb_005192_010 Hb_000300_510--Hb_005192_010 Hb_000922_060 Hb_000922_060 Hb_000300_510--Hb_000922_060 Hb_003682_070 Hb_003682_070 Hb_000300_510--Hb_003682_070 Hb_001421_090 Hb_001421_090 Hb_000300_510--Hb_001421_090 Hb_000684_390 Hb_000684_390 Hb_000300_510--Hb_000684_390 Hb_016219_030 Hb_016219_030 Hb_001842_020--Hb_016219_030 Hb_000560_040 Hb_000560_040 Hb_001842_020--Hb_000560_040 Hb_007904_040 Hb_007904_040 Hb_001842_020--Hb_007904_040 Hb_002759_120 Hb_002759_120 Hb_001842_020--Hb_002759_120 Hb_002053_010 Hb_002053_010 Hb_001842_020--Hb_002053_010 Hb_000388_060 Hb_000388_060 Hb_001842_020--Hb_000388_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0590086 0.259311 0.271583 0.346237 0.0295667 0.107568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.168147 0.158737 0 0.0634197 0.331162

CAGE analysis