Hb_003682_070

Information

Type -
Description -
Location Contig3682: 79866-82488
Sequence    

Annotation

kegg
ID rcu:RCOM_1064760
description acetylglucosaminyltransferase, putative
nr
ID XP_012071895.1
description PREDICTED: uncharacterized protein LOC105633817 isoform X1 [Jatropha curcas]
swissprot
ID Q02527
description Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat3 PE=1 SV=2
trembl
ID A0A067LD42
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10241 PE=4 SV=1
Gene Ontology
ID GO:0016020
description beta- -n-acetylglucosaminyltransferase family protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003682_070 0.0 - - PREDICTED: uncharacterized protein LOC105633817 isoform X1 [Jatropha curcas]
2 Hb_000000_310 0.0618714137 - - metalloendopeptidase, putative [Ricinus communis]
3 Hb_000922_060 0.0671361431 - - kinesin light chain, putative [Ricinus communis]
4 Hb_000300_510 0.0886552013 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
5 Hb_000107_250 0.0896592683 - - voltage-gated clc-type chloride channel, putative [Ricinus communis]
6 Hb_000120_860 0.0900152 - - nucellin, putative [Ricinus communis]
7 Hb_004735_020 0.0902145493 - - PREDICTED: uncharacterized protein LOC105639315 [Jatropha curcas]
8 Hb_001882_020 0.0909194917 - - PREDICTED: uncharacterized protein LOC105628417 [Jatropha curcas]
9 Hb_000684_390 0.0914118266 - - PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Jatropha curcas]
10 Hb_005192_010 0.0981749054 - - PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]
11 Hb_003746_010 0.0981823913 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001029_040 0.0995143171 - - PREDICTED: uncharacterized protein LOC105641058 [Jatropha curcas]
13 Hb_001421_090 0.0996684972 - - hypothetical protein RCOM_1278080 [Ricinus communis]
14 Hb_000815_230 0.1001257405 - - conserved hypothetical protein [Ricinus communis]
15 Hb_022250_010 0.1022409602 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Jatropha curcas]
16 Hb_004994_350 0.1062741935 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Jatropha curcas]
17 Hb_183086_030 0.106861564 - - GTPase-activating protein GYP7 [Gossypium arboreum]
18 Hb_001009_260 0.110612694 - - PREDICTED: uncharacterized aarF domain-containing protein kinase 1 isoform X1 [Jatropha curcas]
19 Hb_000140_340 0.1130721446 - - PREDICTED: protein ABIL1 [Jatropha curcas]
20 Hb_001801_020 0.1133185591 - - PREDICTED: xylosyltransferase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_003682_070 Hb_003682_070 Hb_000000_310 Hb_000000_310 Hb_003682_070--Hb_000000_310 Hb_000922_060 Hb_000922_060 Hb_003682_070--Hb_000922_060 Hb_000300_510 Hb_000300_510 Hb_003682_070--Hb_000300_510 Hb_000107_250 Hb_000107_250 Hb_003682_070--Hb_000107_250 Hb_000120_860 Hb_000120_860 Hb_003682_070--Hb_000120_860 Hb_004735_020 Hb_004735_020 Hb_003682_070--Hb_004735_020 Hb_000000_310--Hb_000107_250 Hb_000000_310--Hb_000300_510 Hb_000684_390 Hb_000684_390 Hb_000000_310--Hb_000684_390 Hb_000000_310--Hb_000120_860 Hb_000000_310--Hb_000922_060 Hb_005192_010 Hb_005192_010 Hb_000922_060--Hb_005192_010 Hb_183086_030 Hb_183086_030 Hb_000922_060--Hb_183086_030 Hb_000922_060--Hb_000300_510 Hb_022250_010 Hb_022250_010 Hb_000922_060--Hb_022250_010 Hb_000300_510--Hb_005192_010 Hb_001421_090 Hb_001421_090 Hb_000300_510--Hb_001421_090 Hb_000300_510--Hb_000684_390 Hb_073973_120 Hb_073973_120 Hb_000107_250--Hb_073973_120 Hb_022693_130 Hb_022693_130 Hb_000107_250--Hb_022693_130 Hb_002053_050 Hb_002053_050 Hb_000107_250--Hb_002053_050 Hb_004705_160 Hb_004705_160 Hb_000107_250--Hb_004705_160 Hb_000270_660 Hb_000270_660 Hb_000120_860--Hb_000270_660 Hb_001009_260 Hb_001009_260 Hb_000120_860--Hb_001009_260 Hb_030959_010 Hb_030959_010 Hb_000120_860--Hb_030959_010 Hb_005116_140 Hb_005116_140 Hb_000120_860--Hb_005116_140 Hb_004735_020--Hb_001009_260 Hb_004735_020--Hb_000120_860 Hb_000629_070 Hb_000629_070 Hb_004735_020--Hb_000629_070 Hb_010344_030 Hb_010344_030 Hb_004735_020--Hb_010344_030 Hb_130589_010 Hb_130589_010 Hb_004735_020--Hb_130589_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.03818 4.52699 4.84482 8.14712 2.07826 2.62809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.73975 1.36885 2.66331 2.30078 11.1889

CAGE analysis