Hb_000084_200

Information

Type -
Description -
Location Contig84: 167130-180935
Sequence    

Annotation

kegg
ID cit:102621296
description uncharacterized LOC102621296
nr
ID XP_012072967.1
description PREDICTED: uncharacterized protein LOC105634688 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYH0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06754 PE=4 SV=1
Gene Ontology
ID GO:0044434
description thioredoxin family protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60040: 167332-174364
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000084_200 0.0 - - PREDICTED: uncharacterized protein LOC105634688 isoform X2 [Jatropha curcas]
2 Hb_005015_060 0.1364178928 - - PREDICTED: developmentally-regulated G-protein 3 [Jatropha curcas]
3 Hb_001014_110 0.1405007628 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
4 Hb_004724_460 0.1420767331 - - hypothetical protein EUGRSUZ_L02100 [Eucalyptus grandis]
5 Hb_000608_380 0.1441952558 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005701_060 0.1493135714 - - hypothetical protein JCGZ_04513 [Jatropha curcas]
7 Hb_000599_200 0.1513342544 - - ABC transporter family protein [Populus trichocarpa]
8 Hb_000539_050 0.1543686669 - - bile acid:sodium symporter, putative [Ricinus communis]
9 Hb_005463_110 0.1556913826 - - PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Jatropha curcas]
10 Hb_017987_030 0.1561110415 - - PREDICTED: uncharacterized protein LOC105630796 [Jatropha curcas]
11 Hb_002218_030 0.1564577716 - - hypothetical protein B456_007G345200 [Gossypium raimondii]
12 Hb_000664_020 0.1565588899 - - tryptophanyl-tRNA synthetase, putative [Ricinus communis]
13 Hb_000228_060 0.1565649909 - - hypothetical protein JCGZ_21532 [Jatropha curcas]
14 Hb_006541_040 0.1584550872 - - PREDICTED: diphthamide biosynthesis protein 2 [Jatropha curcas]
15 Hb_000004_020 0.1594285259 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004445_020 0.1611475438 - - hypothetical protein JCGZ_13166 [Jatropha curcas]
17 Hb_004157_100 0.1625360234 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
18 Hb_015099_030 0.162764814 - - PREDICTED: uncharacterized protein LOC105649867 [Jatropha curcas]
19 Hb_069662_010 0.1638465789 - - PREDICTED: uncharacterized protein LOC103320051 [Prunus mume]
20 Hb_000046_330 0.1650049853 - - PREDICTED: uncharacterized protein LOC105631826 [Jatropha curcas]

Gene co-expression network

sample Hb_000084_200 Hb_000084_200 Hb_005015_060 Hb_005015_060 Hb_000084_200--Hb_005015_060 Hb_001014_110 Hb_001014_110 Hb_000084_200--Hb_001014_110 Hb_004724_460 Hb_004724_460 Hb_000084_200--Hb_004724_460 Hb_000608_380 Hb_000608_380 Hb_000084_200--Hb_000608_380 Hb_005701_060 Hb_005701_060 Hb_000084_200--Hb_005701_060 Hb_000599_200 Hb_000599_200 Hb_000084_200--Hb_000599_200 Hb_000787_160 Hb_000787_160 Hb_005015_060--Hb_000787_160 Hb_002883_030 Hb_002883_030 Hb_005015_060--Hb_002883_030 Hb_015099_030 Hb_015099_030 Hb_005015_060--Hb_015099_030 Hb_001662_100 Hb_001662_100 Hb_005015_060--Hb_001662_100 Hb_001856_180 Hb_001856_180 Hb_005015_060--Hb_001856_180 Hb_000345_160 Hb_000345_160 Hb_005015_060--Hb_000345_160 Hb_005527_020 Hb_005527_020 Hb_001014_110--Hb_005527_020 Hb_004157_100 Hb_004157_100 Hb_001014_110--Hb_004157_100 Hb_000004_020 Hb_000004_020 Hb_001014_110--Hb_000004_020 Hb_000676_080 Hb_000676_080 Hb_001014_110--Hb_000676_080 Hb_054745_010 Hb_054745_010 Hb_001014_110--Hb_054745_010 Hb_006541_040 Hb_006541_040 Hb_001014_110--Hb_006541_040 Hb_004218_280 Hb_004218_280 Hb_004724_460--Hb_004218_280 Hb_003462_070 Hb_003462_070 Hb_004724_460--Hb_003462_070 Hb_000203_230 Hb_000203_230 Hb_004724_460--Hb_000203_230 Hb_000920_030 Hb_000920_030 Hb_004724_460--Hb_000920_030 Hb_000061_020 Hb_000061_020 Hb_004724_460--Hb_000061_020 Hb_069662_010 Hb_069662_010 Hb_000608_380--Hb_069662_010 Hb_006538_120 Hb_006538_120 Hb_000608_380--Hb_006538_120 Hb_000441_060 Hb_000441_060 Hb_000608_380--Hb_000441_060 Hb_005127_030 Hb_005127_030 Hb_000608_380--Hb_005127_030 Hb_000221_140 Hb_000221_140 Hb_000608_380--Hb_000221_140 Hb_001205_300 Hb_001205_300 Hb_000608_380--Hb_001205_300 Hb_026745_020 Hb_026745_020 Hb_005701_060--Hb_026745_020 Hb_162603_010 Hb_162603_010 Hb_005701_060--Hb_162603_010 Hb_005701_060--Hb_001014_110 Hb_025194_100 Hb_025194_100 Hb_005701_060--Hb_025194_100 Hb_000429_150 Hb_000429_150 Hb_005701_060--Hb_000429_150 Hb_004303_040 Hb_004303_040 Hb_005701_060--Hb_004303_040 Hb_000733_190 Hb_000733_190 Hb_000599_200--Hb_000733_190 Hb_001104_130 Hb_001104_130 Hb_000599_200--Hb_001104_130 Hb_000599_200--Hb_000004_020 Hb_009680_020 Hb_009680_020 Hb_000599_200--Hb_009680_020 Hb_002928_090 Hb_002928_090 Hb_000599_200--Hb_002928_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.602361 0.353216 0.605324 0.936673 0.231458 1.21357
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.620333 0.634148 0.0887353 0.669901 1.28077

CAGE analysis