Hb_000787_160

Information

Type -
Description -
Location Contig787: 181289-188876
Sequence    

Annotation

kegg
ID vvi:100259141
description GDP-mannose transporter GONST1
nr
ID XP_012070735.1
description PREDICTED: GDP-mannose transporter GONST1 isoform X1 [Jatropha curcas]
swissprot
ID Q941R4
description GDP-mannose transporter GONST1 OS=Arabidopsis thaliana GN=GONST1 PE=1 SV=2
trembl
ID A0A067KVM8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00810 PE=4 SV=1
Gene Ontology
ID GO:0005458
description gdp-mannose transporter gonst1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58136: 181480-188790
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000787_160 0.0 - - PREDICTED: GDP-mannose transporter GONST1 isoform X1 [Jatropha curcas]
2 Hb_004102_170 0.0567447938 - - PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Jatropha curcas]
3 Hb_000345_160 0.0634739038 - - PREDICTED: acyl-CoA-binding domain-containing protein 4-like [Jatropha curcas]
4 Hb_005015_060 0.0668859681 - - PREDICTED: developmentally-regulated G-protein 3 [Jatropha curcas]
5 Hb_000322_080 0.0690363586 - - hypothetical protein JCGZ_07423 [Jatropha curcas]
6 Hb_004705_170 0.0691077859 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
7 Hb_001662_100 0.0692115988 - - PREDICTED: serine/threonine-protein kinase EDR1-like [Jatropha curcas]
8 Hb_002883_030 0.0715590989 - - PREDICTED: uncharacterized protein LOC105638222 [Jatropha curcas]
9 Hb_000049_020 0.0726339298 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
10 Hb_009569_040 0.0744509364 - - PREDICTED: uncharacterized protein LOC105635573 [Jatropha curcas]
11 Hb_004055_120 0.0745301786 - - PREDICTED: uncharacterized protein LOC105631443 [Jatropha curcas]
12 Hb_000256_150 0.0746055174 - - PREDICTED: trafficking protein particle complex II-specific subunit 120 homolog [Jatropha curcas]
13 Hb_003878_150 0.0777363877 - - PREDICTED: GPI mannosyltransferase 3 [Jatropha curcas]
14 Hb_000300_270 0.0797359939 - - cationic amino acid transporter, putative [Ricinus communis]
15 Hb_000215_300 0.079846754 - - mitochondrial processing peptidase alpha subunit, putative [Ricinus communis]
16 Hb_007481_010 0.079870263 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
17 Hb_004452_110 0.0824423805 - - PREDICTED: uncharacterized protein LOC105639575 isoform X1 [Jatropha curcas]
18 Hb_005725_130 0.0843055665 - - PREDICTED: uncharacterized protein KIAA0930 homolog isoform X2 [Jatropha curcas]
19 Hb_001856_180 0.0847642869 - - PREDICTED: eukaryotic translation initiation factor 3 subunit M [Jatropha curcas]
20 Hb_004037_020 0.0848327485 - - PREDICTED: uncharacterized protein LOC105632366 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000787_160 Hb_000787_160 Hb_004102_170 Hb_004102_170 Hb_000787_160--Hb_004102_170 Hb_000345_160 Hb_000345_160 Hb_000787_160--Hb_000345_160 Hb_005015_060 Hb_005015_060 Hb_000787_160--Hb_005015_060 Hb_000322_080 Hb_000322_080 Hb_000787_160--Hb_000322_080 Hb_004705_170 Hb_004705_170 Hb_000787_160--Hb_004705_170 Hb_001662_100 Hb_001662_100 Hb_000787_160--Hb_001662_100 Hb_000049_020 Hb_000049_020 Hb_004102_170--Hb_000049_020 Hb_000146_040 Hb_000146_040 Hb_004102_170--Hb_000146_040 Hb_004102_170--Hb_000345_160 Hb_001405_210 Hb_001405_210 Hb_004102_170--Hb_001405_210 Hb_005797_010 Hb_005797_010 Hb_004102_170--Hb_005797_010 Hb_004037_020 Hb_004037_020 Hb_000345_160--Hb_004037_020 Hb_000345_160--Hb_004705_170 Hb_001481_060 Hb_001481_060 Hb_000345_160--Hb_001481_060 Hb_000345_160--Hb_000049_020 Hb_000170_090 Hb_000170_090 Hb_000345_160--Hb_000170_090 Hb_004452_110 Hb_004452_110 Hb_000345_160--Hb_004452_110 Hb_002883_030 Hb_002883_030 Hb_005015_060--Hb_002883_030 Hb_015099_030 Hb_015099_030 Hb_005015_060--Hb_015099_030 Hb_005015_060--Hb_001662_100 Hb_001856_180 Hb_001856_180 Hb_005015_060--Hb_001856_180 Hb_005015_060--Hb_000345_160 Hb_003020_100 Hb_003020_100 Hb_000322_080--Hb_003020_100 Hb_001500_100 Hb_001500_100 Hb_000322_080--Hb_001500_100 Hb_102698_010 Hb_102698_010 Hb_000322_080--Hb_102698_010 Hb_000046_500 Hb_000046_500 Hb_000322_080--Hb_000046_500 Hb_000477_100 Hb_000477_100 Hb_000322_080--Hb_000477_100 Hb_000215_300 Hb_000215_300 Hb_004705_170--Hb_000215_300 Hb_007472_070 Hb_007472_070 Hb_004705_170--Hb_007472_070 Hb_004705_170--Hb_004037_020 Hb_000778_010 Hb_000778_010 Hb_004705_170--Hb_000778_010 Hb_163175_010 Hb_163175_010 Hb_004705_170--Hb_163175_010 Hb_002414_050 Hb_002414_050 Hb_001662_100--Hb_002414_050 Hb_009569_040 Hb_009569_040 Hb_001662_100--Hb_009569_040 Hb_001662_100--Hb_002883_030 Hb_003544_160 Hb_003544_160 Hb_001662_100--Hb_003544_160 Hb_003878_150 Hb_003878_150 Hb_001662_100--Hb_003878_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.18846 3.61182 4.75571 8.43455 2.55413 5.23937
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.24716 3.19356 2.86796 5.43736 5.25547

CAGE analysis